KEGG   Massilia sp. YMA4: DPH57_03835
Entry
DPH57_03835       CDS       T05528                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
masy  Massilia sp. YMA4
Pathway
masy02020  Two-component system
masy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:masy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DPH57_03835
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DPH57_03835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:masy03021]
    DPH57_03835
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:masy02035]
    DPH57_03835
Transcription machinery [BR:masy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DPH57_03835
Bacterial motility proteins [BR:masy02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    DPH57_03835
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: AXA90374
UniProt: A0A7U5XVX2
Position
complement(853322..854092)
AA seq 256 aa
MALVATENYSESYGASYGESYGEAFAATTAAAAMTPADEQKHLLAYAPLVKKIVRQLNSQ
VAGAIDREDMEQIGLMGLLEALRRYGEPDAGFGSYASLRIRGAILDELRRQDWRPRAVRQ
QSHKLRDAVRALTRKLGREPSEQEAIAGLGITADEYMAYQLDENAEVLASFDDLLQEQGS
EMGAGHSPSPEEQLMVRRSLEQALNGLNEREQRVVQMYYEFELSYKEIAAVLDLTDARVC
QLNKAALNKMKAVLQA
NT seq 771 nt   +upstreamnt  +downstreamnt
atggcgttggtagcaaccgaaaactattccgaaagctatggcgcgagctatggcgaaagc
tacggcgaagcattcgccgcaaccaccgcggccgcggcaatgaccccggccgatgaacaa
aagcacctgctggcgtacgcgccgctggtcaagaagatcgtgcgccagctcaattcccag
gtagccggcgccatcgaccgcgaggacatggagcagatcggcctgatgggcttgctggaa
gcgctgcgccgctacggcgagcccgatgcgggcttcggcagctatgccagcctgcgcatc
cgcggcgccatcctggacgagctgcgccggcaggactggcgtccgcgcgccgtgcgccag
cagagccacaagctgcgcgacgccgtgcgcgcgctgacgcgcaagctgggccgcgagccg
agcgaacaggaagccatcgccggcctgggcatcacggccgacgaatacatggcctaccag
ctcgacgagaacgccgaggtactggccagcttcgacgacctgctgcaggagcaagggtcg
gaaatgggcgcgggccactcgcccagcccggaagagcaattgatggtgcggcgcagcctg
gagcaggccctgaacggcctgaacgagcgcgagcagcgcgtcgtgcagatgtattacgag
ttcgagctgagctacaaggaaatcgcggccgtgctggacctgacggatgcccgcgtatgc
cagctcaacaaggctgcgctgaacaagatgaaagcggtgctgcaggcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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