KEGG   Massilia sp. YMA4: DPH57_12735
Entry
DPH57_12735       CDS       T05528                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
masy  Massilia sp. YMA4
Brite
KEGG Orthology (KO) [BR:masy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:masy03032]
    DPH57_12735
   03400 DNA repair and recombination proteins [BR:masy03400]
    DPH57_12735
Enzymes [BR:masy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DPH57_12735
DNA replication proteins [BR:masy03032]
 Prokaryotic type
  DNA Topoisomerases
   DPH57_12735
DNA repair and recombination proteins [BR:masy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DPH57_12735
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: AXA91935
UniProt: A0A7U5XZE2
Position
complement(2991772..2994444)
AA seq 890 aa
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFSMHESNYVHN
RPYVKCARVVGDTMGKYHPHGDSSIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDAAAAM
RYTECRLDKIAGELLADIDKETVDFQPNYDGKEKEPTVLPTRVPNLLINGSSGIAVGMAT
NIAPHNLSEVINGALHVLANPACSVDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGKEGGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLMNLKELLATFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPLAKTELMARAWDSSL
VREMLARTGDEGQAGIEAFRPEHLPKHYGMQPDGLYKLSDDQAQEILQMRLQRLTGLEQD
KIVNEYKDVMAQIADLLDILAKPARVTAIIGDELNAAKLEYGAKDERRSTIEHNATDLET
EDLITPQDMVVTLSHMGYMKAQPISEYRAQKRGGRGKQAMATKDEDWIDQLFIANTHDYI
LCFSNRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLQDNEKITVVLPLSGENRTFPEDHYV
FMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDSGKAVRF
DENDVRPMGRTARGVRGMNLEEGQNVIALLVAENEQQSVLTATENGYGKRTPITEYTRHG
RGTKGMIAIQTSERNGKVVAATLVDTTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLI
AVEDGTKLSGLQRIVEADADEVELEPEGGAAAATPAAEPDTPAADDTAAE
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggatcaattcgcaaaagaaacaatcccaatttccctcgaagaagagatgcgcaagagc
tacctcgattacgcgatgagcgtgatcgtgggccgcgccttgccggatgcgcgcgacggc
ttgaagccagtgcaccgccgggtgttgttctcgatgcacgagagtaattacgtgcacaac
cgtccatacgtcaagtgcgcgcgcgtcgtcggcgacacgatgggtaaataccacccgcac
ggcgactcgtcgatctacgacacgctggtgcgcatggcccaggacttctcgctgcgctat
acgctggtggacggccagggcaacttcggttccatcgacggcgacgccgcggcggccatg
cgttacaccgagtgccgcctggacaagatcgccggcgagctgctggccgacatcgacaag
gaaaccgtcgacttccagccgaactacgatggcaaggaaaaagagccgaccgtgctgccc
acgcgcgtgccgaacctgctgatcaacggctcctccggtatcgcggtcggcatggcgacc
aatatcgccccgcacaacctgtcggaagtgatcaacggcgcgctgcacgtgctggccaac
ccggcctgctcggtggacgaactgatcgaactgatcccggcgccggatttcccgaccggc
ggcatcatctacggcgtctccggcgtgcgcgacggctaccgcacgggccgcggccgcgtc
gtcatgcgcgccaagacccacttcgaggaattcggcaaggaaggcggtcgcacggcgatc
atcgtcgacgagctgccataccaggtcaataaaaaatccctgctggagcgcatcgccgag
aacgtgcgcgacaagaagctggaaggcatctccgacatccgcgacgagtccgataaatcg
ggcatgcgcgtcgtcatcgagttgaagcgcggcgaagtgccggaagtggtgctgaacaac
ctgtacaagcagacccagctgcaggacaccttcggcatgaacatggtcgcgctggtcgac
ggccagccgaagctgatgaacctgaaggagctgctggccacgttcctgtcgcaccgccgc
gaagtggtcacgcgccgcaccgtgttcgagctgcgcaaggcgcgcgaacgcggccacgtg
ctggaaggcctggcggtcgcgctggcgaacatcgacgacttcatcgccatcatcaaggcg
gcgccgacgccgccgctggcgaagaccgaactgatggcgcgcgcctgggattcgtccctg
gtgcgcgaaatgctggcccgcacgggcgacgaaggtcaggccggcatcgaggcgttccgc
cccgagcacctgccgaagcactacggcatgcagccggacggcctgtacaagctgtccgac
gaccaggcccaggaaatcctgcagatgcgcctgcagcgcctgacgggcctggagcaggac
aagatcgtcaacgaatacaaggacgtgatggcgcagatcgccgacctgctggacatcctg
gccaagccggcccgcgtgaccgcgatcatcggcgacgaactcaatgcggccaagctggaa
tacggcgccaaggacgagcgccgctcgaccatcgagcacaacgcgaccgacctggaaacg
gaagacctgatcacgccgcaggacatggtggtcaccctgtcgcacatgggctacatgaag
gcccagccgatctccgaataccgcgcgcagaagcgcggcgggcgcggcaagcaggccatg
gcgaccaaggacgaggactggatcgaccagctcttcatcgccaacacgcacgactacatc
ctgtgcttctcgaatcgcggcaggatgtattggctgaaggtgtgggaagtgccgcagggt
tcgcgcacctcgcgcggcaagccgatcgtcaacatgttcccgctgcaggacaacgagaag
atcaccgtcgtgctgccgctgtcgggcgaaaaccgcacgttcccggaagaccattacgtg
ttcatgtccaccagcctgggcaccgtcaagaagacgccgctgaaggacttcagcaatccg
cgcaaggccggcatcatcgccgtcgacctggacgagggcgacttcctgatcggcgccgcg
ctgaccgacggcaagcacgacgtgatgctgttctccgactccggcaaggcggtgcgcttc
gacgagaacgacgtgcgcccgatgggccgcacggcgcgcggcgtgcgcggcatgaacctg
gaagaaggccagaacgtgatcgcgctgctggtcgcggagaacgagcagcagtccgtgctg
acggccaccgagaacggctacggcaagcgcacgccgatcacggaatacacccgtcacggc
cgcggtaccaagggcatgatcgcgatccagacctccgagcgtaacggcaaggtcgtcgcg
gccacgctggtggacaccaccgacgagatcatgctgatcacgacgggcggtgtgctgatc
cgcacccgcgtctccgagatccgcgagatgggccgggccacccagggcgtcaccctgatc
gcggtggaggatggcaccaagctgtccggcctgcagcgcatcgtcgaggcggatgcggac
gaagtcgagctcgagccggaaggcggcgcggcggcggcaacgcctgcggcggagcccgac
acgccagcggccgacgacaccgcggccgaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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