KEGG   Massilia sp. YMA4: DPH57_17815
Entry
DPH57_17815       CDS       T05528                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
masy  Massilia sp. YMA4
Pathway
masy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:masy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DPH57_17815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:masy03400]
    DPH57_17815
Enzymes [BR:masy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     DPH57_17815
DNA repair and recombination proteins [BR:masy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DPH57_17815
SSDB
Motif
Pfam: UDG DUF4130
Other DBs
NCBI-ProteinID: AXA92841
UniProt: A0A7U5Y0N8
Position
complement(4163007..4164527)
AA seq 506 aa
MSIDGEPGDADDTAAPLDAVALALAGHPIPVATFGDFRTAARDLIVRRVPPESVQWSGSE
APHGDLLSAATSGLVPPLPADLLAQPPAPPPRIPRSLMEMLQSAACYRAPDRWAFLYKIV
WRWQQGQQEILSMADEDGARLQHMVKAVRHEEHDMHAYLRFRERPPEAGDPRFVAWFEPA
HDVLPQVAQHFARRMGKTSWMIGTPEATVLWDGHTLHSTGPLMRSAADVEDSGEALWLTY
YRSIFNPARLNADIMHGHIRTRFWKNLPEAAVVPHMVSQAAAGARRVGQLDTVGKRGGTT
IPIAAEKAAPERQQPSSLDDCRRCDLWQNATQAVAGQGARHAKIMLVGEQPGDQEDLAGK
PFVGPAGALLDKAMEEAGMDRRKVYVTNAVKHFKWEPRGKRRLHKTPAQKEVMACHYWLE
TELETIAPDIVVALGSTALKSILQSGSVTMKDYMGQPFQHDGRWVVVTYHPSYALRVPSA
EARHEAVAAIVAALKLAQRLADGEQP
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgagcatcgacggcgagccgggcgacgccgacgataccgcggcgcccctcgatgccgtc
gcgctggcgctggccggccacccgatccccgtcgccacgtttggcgacttccgcacggcc
gcgcgcgacctgatcgtgcgccgggtcccgcccgaatccgtacaatggtccggcagcgaa
gcgccgcatggcgatttgctcagcgcggccacgtcgggcctggtgccaccgctgccggcg
gacctgctggcacagccgccggctccgccgccgcgcattccccgcagcttgatggagatg
ctgcaaagcgccgcatgctaccgcgccccggaccgctgggcgttcctgtacaagatcgtg
tggcgctggcagcagggacaacaggagatcctgtcgatggccgacgaagacggcgcgcgc
ctgcagcacatggtgaaggcggtgcgccacgaggaacacgatatgcacgcctacctgcgc
tttcgcgaacgaccgccggaggcgggcgacccgcgcttcgtggcctggttcgaaccggcg
cacgatgtgctgccgcaggtggcccagcacttcgcccggcgcatgggcaagaccagctgg
atgatcggcacgcccgaggccaccgtgctgtgggacggccacacgctgcacagcaccggg
ccgctgatgcgcagcgcggcggacgtggaggacagcggcgaggcgctgtggttgacgtac
taccgcagcatcttcaatcccgcgcgcctgaacgcggacatcatgcacggtcatatccgt
acccgcttctggaagaacctgccggaagcggccgtggtgccgcacatggtgtcgcaggcc
gccgccggcgcgcgcagagtgggccagctggacacggtgggaaaacgcggcggcaccacg
atccccatcgcggccgagaaggcggcgccggagcgccagcaacccagttcgctggacgat
tgccgccgctgcgacctgtggcagaacgccacgcaggcggtggcggggcagggcgcgcgc
cacgccaagatcatgctggtgggcgagcagccgggcgaccaggaggacctggccgggaag
cccttcgtcggcccggccggcgcgctgctggacaaggcgatggaggaagcgggcatggac
cgccgcaaggtctacgtcaccaacgccgtcaagcacttcaagtgggagccgcgcggcaag
cgccgcctgcacaagacgcccgcgcagaaggaagtaatggcctgccactactggctcgag
accgagctggaaacgatcgcgccggacatcgtggtggcgctgggcagcacggcgctgaaa
tcgatcctgcagtcgggcagcgtgacgatgaaggactacatgggccagccgttccagcac
gacgggcgctgggtcgtcgtcacctaccacccgtcatacgcgctgcgggtgccgagcgcc
gaggcgcggcatgaggcggtggcggccatcgtcgcggcgctgaaactggcgcaacggctg
gcggacggcgaacagccctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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