KEGG   Massilia sp. YMA4: DPH57_22230
Entry
DPH57_22230       CDS       T05528                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
masy  Massilia sp. YMA4
Pathway
masy00300  Lysine biosynthesis
masy00470  D-Amino acid metabolism
masy01100  Metabolic pathways
masy01110  Biosynthesis of secondary metabolites
masy01120  Microbial metabolism in diverse environments
masy01230  Biosynthesis of amino acids
Module
masy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:masy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DPH57_22230
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DPH57_22230
Enzymes [BR:masy01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     DPH57_22230
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AXA93623
UniProt: A0A7U5Y244
Position
complement(5168526..5169389)
AA seq 287 aa
MKLKFTKMHGAGNDFVVIDAINQQIDFSPAQWQALADRRFGVGADQMLVVEKSAQPGCDF
RYRIFNSDGGEVEQCGNGARAFVKFVAEKGLTDRRSICVETMAGVISPRLEEDGSVTVDM
GAPVLEPALVPFDTEGLQGQPQGQDTLWPLVLELAGEKETVLVSVLSMGNPHAVQVVTDV
DTAPVELTGPLIELHPHFPKRVNAGFMQVLDRQHIRLRVFERGAGETLACGTGACAAAVA
GIRRGLLDSPVRVDARGGQLSIAWAGEGQPVYLTGPAVTVFEGEIEL
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaaactcaaattcaccaagatgcatggcgcgggcaacgacttcgtggtcatcgacgcc
atcaaccagcagatcgacttctcgcccgcccagtggcaagccctggccgaccgccgtttc
ggtgtcggcgccgaccagatgctggtcgtggaaaaatccgcgcagcccggctgcgatttc
cgctatcgcattttcaacagcgatggcggcgaggtggaacaatgcggcaacggcgcccgc
gcttttgtgaaattcgtggccgagaaaggcctgacggaccggcgcagcatctgcgtcgaa
acgatggctggcgtcatttcgccgcgcctggaagaagacggcagcgtcaccgtggacatg
ggcgcgcctgtgctggagccggccctggtgccattcgacacggaaggcctgcaaggtcag
ccgcaaggccaggacacgttgtggccgctggtgctggaactggccggcgaaaaggaaacc
gtgctggtgtcggtgctgtcgatgggtaatcctcatgcggtgcaggtcgtgaccgatgtg
gacaccgcgcctgtcgagctgaccgggccgctgatcgagctgcacccgcatttcccgaaa
cgcgtcaatgccggtttcatgcaggtgctcgaccgccagcacatccgcctgcgcgtgttc
gaacgcggtgccggcgagacgctggcctgcggcacgggcgcctgcgcggctgccgtggcc
ggcatccgccgtggcctgctggattcaccggtgcgcgtggatgcgcgcggcggccaactg
tcgatcgcctgggccggcgaaggccagcccgtctacctgacgggcccggccgtgacggtg
ttcgagggcgaaatcgagctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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