KEGG   Massilia sp. YMA4: DPH57_27095
Entry
DPH57_27095       CDS       T05528                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
masy  Massilia sp. YMA4
Pathway
masy00061  Fatty acid biosynthesis
masy00071  Fatty acid degradation
masy01100  Metabolic pathways
masy01212  Fatty acid metabolism
masy02024  Quorum sensing
Module
masy_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:masy00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    DPH57_27095
   00071 Fatty acid degradation
    DPH57_27095
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DPH57_27095
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:masy01004]
    DPH57_27095
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:masy04147]
    DPH57_27095
Enzymes [BR:masy01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     DPH57_27095
Lipid biosynthesis proteins [BR:masy01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   DPH57_27095
Exosome [BR:masy04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   DPH57_27095
  Exosomal proteins of breast cancer cells
   DPH57_27095
SSDB
Motif
Pfam: AMP-binding DUF4880
Other DBs
NCBI-ProteinID: AXA94478
UniProt: A0A7U5Y3R6
Position
6323267..6324814
AA seq 515 aa
MTRFIDTIRATMREHAGATAIVQLAGGVASERVVSYGMLERACDALAAALTQRCAPGATV
GLVAANSVAWIEADLALLAGGFVEVPVPLAFSAEQAAHLLSACSAVLTDDEGQRRFEQWR
AAAPQAFQDMPCLSIGALAAGDAAASAAPGPQDRVCKVIHTSGTTSAPKGVRIRAHGLDA
LLASLWQHATVADYARYLNLVPFSLLIEQVTALYMPFMAGGTVVLPPTGEKPLGDPGAVA
ADKLALLRRARPTAVTLPPSLVEALANAADGLPALDTEALCEALFGRATAPLIAAGGAPV
AAATIERLARRGIVVLQGYGLSENSSVVSWNTRAANRIGTVGKPLAHVACKLGPDGELGV
RSASLFAGYSGSDPSACHTDADGWLWTGDLAAIDADGYITIIGRKKNLIITAHGRNVSPE
PAEASYRSVPGVADIVLLGEGQETLSAFVLTAPGVDHGVLRGALERHGERWLSGVERASD
FVFEADAPALRASLFTVTGRPRRPEVERYVRARAA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgacgcgcttcatcgacaccatccgcgccacgatgcgcgagcacgccggggccacggcg
atcgtccagctggccggcggcgtggcatcggagcgggtcgtcagctacggcatgctggaa
cgcgcctgcgacgcactcgcggcggcactgacgcagcgttgtgcgccaggtgccacggtc
gggctggtggcggccaactcggtcgcgtggatcgaggccgacctggccctgctggcgggc
ggctttgtcgaggtgccggtgccgctggcgttcagcgccgagcaggccgcccacctgctg
tccgcgtgcagcgcggtgctgaccgacgacgaaggccaacgccgcttcgaacaatggcgt
gcggccgcaccgcaggcgttccaggacatgccgtgcttgtccatcggcgctctggccgcg
ggcgacgcggccgccagcgcggcacccgggccgcaagaccgtgtctgcaaggtgatccac
acctccggcaccaccagcgcgccgaagggcgtgcggatccgcgcccatgggctcgatgcg
ctgctggcatcgctgtggcagcacgccacggtggcggactatgcgcgctacctgaacctg
gtgccgttcagcctcctgatcgagcaggtgacggcgctgtacatgccgttcatggccggc
ggcaccgtggtgctgccgcccactggcgagaaaccgttgggcgatccgggcgcggtggcg
gcggacaagctggcgctgctgcggcgtgcccggcccaccgcggtgaccttgccgccgtcg
ctggtggaggcgctggccaatgcggccgatggcctgccggcgctggacaccgaggcgttg
tgcgaggcgctgttcggtcgcgcgacggcaccgctgatcgccgccggtggcgcaccggtg
gccgccgccacgatcgaacggctggcgcggcgcggcatcgtcgtgctgcaggggtatggc
ctgagcgagaacagctcggtggtgtcgtggaacacccgcgccgccaatcgcatcggcacc
gtcggcaagccgctggcccacgtggcctgcaagctggggccggacggcgagctgggcgtg
cgcagcgcgtcgctgttcgccggctacagcggcagcgatcccagcgcctgccataccgat
gccgacggctggctgtggaccggcgacctggcagcgatcgacgccgacggctacatcacg
atcatcggccgcaagaagaacctgatcatcacggcgcacggccgcaacgtgtcgccggaa
ccggccgaggcgtcctatcgcagcgtgccgggcgtggcggacatcgtgctgctgggcgaa
gggcaggagacgctgtcggcgttcgtgctgacggcgcccggcgtcgaccacggcgtcctg
cgcggcgcgctggaacggcacggcgaacgctggctgtccggcgtcgaacgggccagcgat
ttcgtcttcgaagcggacgcgccggcgctgcgcgccagcctgttcaccgtcacgggccgg
ccacgccgaccggaagtggaacgctacgtacgcgcccgggccgcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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