KEGG   Pseudoduganella armeniaca: C9I28_12945
Entry
C9I28_12945       CDS       T05378                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
masz  Pseudoduganella armeniaca
Pathway
masz03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:masz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    C9I28_12945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:masz03400]
    C9I28_12945
DNA repair and recombination proteins [BR:masz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     C9I28_12945
SSDB
Motif
Pfam: Ku DUF4611
Other DBs
NCBI-ProteinID: AVR96500
UniProt: A0A2R4CAF3
Position
complement(2964507..2965616)
AA seq 369 aa
MARALWKGAISFGLVHIPVELHSAVKSNDLDLTMLDKRDFSPIGYKRYNKTTEKEVGWDN
IIKGYEYQAGEYVVLSDEDLRQANVKATQTIDILAFVDAEDVPLTYYETPYYLAPGRGGD
KVYALLRETLRRAGKIGIATVVIRTKQHLCALVAAEDGIIMNTLRYADEIRDTEGLNLPD
KGTKATGIKEKELEMALSLVEGMSEDWAPEQYHDTYKDDVLALVEKKIKAKQTKTITMPS
KDDEAAPSTNVIDLVALLKQSLGAKPGKGKAAAADEDEEEDEVEADEDTDDDEPPPKARR
PAPRGSASVNARSGSRTGTASKSTATAKAKASPAKAEASKSVAKKAVAKPAAKKSTAKSA
STSTRRRAA
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcacgtgcgctatggaaaggcgccatcagcttcggcctggtgcacataccggtcgag
ctgcattcggccgtcaagagcaatgacctcgacctgacgatgctcgacaagcgcgacttc
tcgcccatcggctacaagcgctacaacaagacgacggaaaaggaagtcggctgggacaac
atcatcaagggctatgaataccaggccggcgaatacgtggtgctgtccgacgaggacctg
cgccaggccaacgtcaaggccacccagaccatcgacatcctggccttcgtcgatgccgag
gacgtgccgctgacgtattacgaaacgccgtactacctggcgccgggccgcggcggcgac
aaggtctacgcgctgctgcgcgagaccctgcgccgcgccggcaagatcggcatcgccacg
gtggtgatccgcaccaagcagcacctgtgcgcgctggtcgcggccgaagacggcatcatc
atgaacaccctgcgctatgccgacgagattcgcgacacggagggcctgaacctgcccgac
aagggcaccaaggctaccggcatcaaggagaaggaactggagatggcgctgtcgctggtg
gaaggcatgagcgaggactgggcgccggagcagtaccacgacacgtacaaggatgacgtg
ctcgccctggtcgagaagaagatcaaggccaagcagaccaagaccatcaccatgccgtcg
aaggacgacgaggcggcgccgtccaccaacgtgatcgacctggtggcgctgctgaagcag
tcgctgggcgccaagccgggcaagggcaaggcggcggcggccgacgaggatgaggaagaa
gacgaggtcgaagccgacgaggacacggacgacgacgaaccgccgccgaaggcgcgccgg
ccggcgccgcgcggctctgccagcgtgaacgcgcgcagtggcagccgtaccggcacggcc
agcaagagtaccgcgaccgccaaggccaaggccagcccggccaaggcggaggcttcgaag
tcggtggcgaagaaggcggtggcgaagccggcggcgaagaagagcacggccaagtccgcg
agcacgtcgacgcggcgtcgcgcggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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