KEGG   Pseudoduganella armeniaca: C9I28_26105
Entry
C9I28_26105       CDS       T05378                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
masz  Pseudoduganella armeniaca
Pathway
masz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:masz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C9I28_26105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:masz03400]
    C9I28_26105
Enzymes [BR:masz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C9I28_26105
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C9I28_26105
DNA repair and recombination proteins [BR:masz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C9I28_26105
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: AVR98719
UniProt: A0A2R4CGF2
Position
5990960..5991793
AA seq 277 aa
MPELPEVEVTRRGVAPHIEGRAVRDVVLRRAGLRWPFPACLPEVLADRTVVTTGRRGKYL
LVEFEHGTLIIHLGMSGHLRVLPPGVPPEKHDHFDLVVEGAEGRQVLRMTDPRRFGAVLW
HPKDDGDVDAHLLLRGLGVEPLGPDFTGELLYRQTRGRSAAIKQVLLAGDIVVGVGNIYC
SESLFRAGINPKTPAGRISRARYDKLAQAIREVLAEAIVQGGSTLRDFISVNGQSGYFQQ
SYFVYDRADVPCRVCATPIRQIKQGQRSTFYCIKCQK
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccagaactgccagaagttgaagtgacccggcgcggcgtcgcgccccatatcgaaggc
cgcgccgtgcgcgacgtggtgctgcgccgcgccggcctgcgctggcccttcccggcctgc
ctgcccgaagtgctggccgaccgcaccgtcgtgacgacgggccggcgcggcaaatacctg
ctggtcgaattcgagcacggcaccctgatcatccacctcggcatgtcgggccacctgcgc
gtgctgccgccgggcgtaccgcccgagaagcacgaccatttcgacctggtcgtcgagggc
gccgagggccgccaggtgctgcgcatgaccgacccgcgccgcttcggcgccgtgctgtgg
cacccgaaggacgacggcgacgtcgacgcccacctgctgctgcgcggcctgggcgtggaa
ccgctcgggcccgatttcacgggcgagctgctgtaccgccagacacgcgggcgcagcgcc
gccatcaagcaggtgctgctggcgggcgacatcgtcgtcggcgtcggcaatatctactgt
tccgagagcctgttccgcgccgggatcaacccgaagacaccggccggacgcatcagccgg
gcgcgctacgacaagctggcgcaggcgatccgggaggtgctggccgaggccatcgtccag
ggcggcagcacgctgcgcgacttcatcagcgtaaacggccagtccggctacttccagcaa
tcgtatttcgtgtacgaccgggccgacgtgccatgccgcgtgtgcgccacgccgatccgc
cagatcaagcagggccagcgctccaccttctattgcatcaagtgtcaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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