KEGG T00433: MAV

Mycobacterium avium 104: MAV_1537

Entry

MAV_1537          CDS       T00433

Name

(GenBank) transcriptional regulator, AraC family protein

K13529

AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

mav Mycobacterium avium 104

Pathway

mav03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:mav00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MAV_1537
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mav03000]
    MAV_1537
   03400 DNA repair and recombination proteins [BR:mav03400]
    MAV_1537
Enzymes [BR:mav01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     MAV_1537
Transcription factors [BR:mav03000]
Prokaryotic type
  Helix-turn-helix
   AraC family
    MAV_1537
DNA repair and recombination proteins [BR:mav03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MAV_1537

SSDB

Motif

Pfam:

AlkA_N Ada_Zn_binding HTH_18 HhH-GPD HTH_AraC HHH DUF6233

Other DBs

NCBI-ProteinID:

ABK65898

UniProt:

A0A0H2ZU54

Position

complement(1493896..1495395)

AA seq 499 aa
MHDDFERCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA
GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAARLGYTTRQLERL
LQAEVGAGPLALARAQRAQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVFESPPS
VLRRRAAARCASTANSPGAVCLRLPVRTPFGFQGVFGHLAASVVPGCEEVRDGAYRRTLR
LGFGTGIVTLTPAADHVRCELVLDDFRDLTAAIARCRRLLDLDADPEAVDEAVAADPQLA
PAVRKAPGQRIPRTVDEAELAVRAVLGQQVSIRAARTHAGRLVAAYGRAVHDPEGTLTHT
FPSVQQLADVDPIHLAVPKARQRTLAALVAGLADRSIVLDTGCDWQSARTQLLALPGVGP
WTAEVIAMRGLGDPDAFPAADLGLRVAAKRLRLPSSQRSLTAASARWRPWRSYATQYLWT
TLEHPVNHWPPQQPSKETA

NT seq 1500 nt +upstreamnt +downstreamnt
gtgcacgacgatttcgaacgctgctaccgcgccgtccagtccaaggatgcgcggttcgac
ggctggttcgtcaccgccgtgctgaccaccggaatctactgccggcctagttgcccggtg
cggccgccgttcgcccgtaatgtgcggttttatccgaccgcggcggccgctcagcgcgcc
ggcttccgggcctgcaagcggtgccgtcccgacgcctcgccgggatcgccggaatggaac
gtgcgcggcgacgtggtggcgcgcacgatgcggctgatcgccgacggcacggtggaccgc
gacggtgtcggcggcctggccgcccggctgggctacaccacccggcagctggagcggttg
ctgcaggcggaggtcggcgccggtccgctcgcgctggcccgggcgcaacgcgcccagacg
gcgcgggtgctgatcgagaccacggagctgcccttcggcgacgtggcattcgccgccggc
ttctccagcattcgtcagttcaacgacaccgtgcgcgcggtgttcgaaagcccgccgagc
gtgctgcgccggcgcgccgcggcgcgctgcgcatccacggccaattcgcctggcgccgtg
tgccttcggctgccggtccgcacacccttcggcttccagggcgtcttcggtcacctcgcc
gcgagcgtcgttcccgggtgcgaggaggtccgcgacggcgcctaccgacgcacgctgcgg
ctggggttcggcaccggcatcgtcacgttgacccccgccgccgaccacgtccgttgcgag
ctggtgctcgacgacttccgggacctgacggcggcgatcgcccgttgccggcggctgctg
gatctcgacgccgaccccgaagcggtggacgaggcggtggccgccgacccgcagctcgcc
ccggcggtgagaaaggcgcccggccaacgcattccgcgcaccgtcgacgaggccgagctc
gcggtgcgcgccgtgctgggccagcaggtgtccatccgggcggcgcgcacccatgcgggg
cgtttggtcgccgcctacggccgggcggtccacgaccccgagggaaccttgacccacacc
ttcccgtcggtgcagcagctggccgacgtcgaccccatccatctggcggtgcccaaggcc
cggcagcgcacgctggccgcgctggtcgccggcctcgccgaccgcagcatcgtcctggac
accgggtgcgactggcaaagcgcccgaacacaattgctggcattaccgggagtcggcccg
tggaccgcggaagtcattgcgatgcgcggcctgggcgaccccgatgcgttcccggccgcc
gacctgggtctgcgcgtcgcggccaaacggctccgactgccgtcgagccagcggtcgctg
accgctgccagcgcacgctggcggccctggcgttcctatgccacgcaatacctttggacc
actctcgagcatccggtgaaccattggccaccgcagcagccatcgaaggagacagcatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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