KEGG   Mycobacterium avium subsp. paratuberculosis E1: RC58_05615
Entry
RC58_05615        CDS       T03787                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
mavi  Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    RC58_05615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mavi03400]
    RC58_05615
Enzymes [BR:mavi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     RC58_05615
DNA repair and recombination proteins [BR:mavi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     RC58_05615
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Peptidase_S66
Other DBs
NCBI-ProteinID: AJK74563
UniProt: A0A7L5MH33
Position
complement(1178995..1180242)
AA seq 415 aa
MTRAATSEPNSAENPFPVRAVAIRVAGWIDRLGTVWVEGQLAQVSLRPDSKTVFMVLRDP
AADMSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLA
RIERLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVKTVAAGRWPAVRFAVR
NTAVQGPNAVAQIVEALRELDRDPEVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV
ISAVGHEPDNPLCDLVADVRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSRE
QRALAQIRSRPVLAEPLRALTARAEEVHRARSAIRHDVTRLTAAETERIGHLRARLATLG
PAATLARGYAVVQTVGAGGPHVLRSVGDAPAGTRLRVRVADGAVAALSEGPTDGE
NT seq 1248 nt   +upstreamnt  +downstreamnt
gtgacccgagccgctacctccgaaccgaactccgccgaaaatccatttccggtgcgcgcg
gtggcaatccgggtcgcgggctggatcgacaggctgggcacggtgtgggtggagggtcag
ctggcccaggtgtcgctgcggccggactccaaaaccgtgttcatggtgctgcgtgacccg
gccgccgacatgtcgctgaccgtgacctgcccgcgcgacctggtgctcaacgccccggtg
aaactggccgaaggcacccaggtggtcgtgtgcggcaagccctcgttctacacgggccgg
ggcacgttttcgctgcggctgtccgagatccgcgccgtcggggtgggcgaactgctggcc
cgcatcgagcggctacgccggctgctggacgccgaagggcttttcgacccccgcctcaag
cggccaattcccttcctgcccaacatgatcgggctgatcaccggccgggcgagcgccgcc
gagcgggacgtgaaaaccgtcgcggcggggcgctggcccgcggtgcgtttcgcggtgcgc
aacaccgcggtgcagggacccaacgcggtcgcgcagatcgtggaggccctgcgcgaactc
gaccgggaccccgaggtcgacgtcatcgtgctcgcccgcggcggcggcagcgtggaggac
ctgttgccgttctccgacgagacgctgtgccgcgccatcgccgcctgccgcaccccggtg
atcagcgcggtcggtcacgaacccgacaacccgctgtgcgatctggtcgccgacgtgcgc
gcggccacccccaccgacgccgcgaagaaggtggtgcccgacaccgcggccgaacagcgg
ctgatcgacgacctgcggcggcgcagcgcacaggcgttgcgcaactgggtatctcgcgag
caacgcgcgctggcgcagatccgcagccgcccggtgctggccgagccgttgcgggcgttg
accgcacgcgccgaggaggtgcaccgtgcccggtcggcgattcggcacgacgtcacccgg
ttgaccgccgccgaaaccgagcggatcggccacctgcgcgcccggctggcgacgttgggc
ccggcggccaccctggcccgcggttacgccgtggtgcagaccgtcggcgccggcggccct
cacgtgctgcgttcggtgggcgacgcgccggcgggcacccggctgcgggtccgggtcgcc
gacggcgccgtggcggcgctgagcgagggaccgaccgatggcgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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