KEGG   Mycobacterium avium subsp. paratuberculosis E1: RC58_20030
Entry
RC58_20030        CDS       T03787                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mavi  Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RC58_20030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mavi03400]
    RC58_20030
Enzymes [BR:mavi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RC58_20030
DNA repair and recombination proteins [BR:mavi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RC58_20030
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AJK77027
UniProt: A0A7L5MPS4
Position
complement(4332333..4333151)
AA seq 272 aa
MRLATWNVNSIRSRLPRVLDWLARTEVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN
QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA
VGDPHYAYKLDWLAALRDSAAAWLREDPAAQIALAGDWNIAPQDDDVWSMEFFAGATHVS
EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV
THAQIDREERKGKGASDHAPVLVDVSRDEPPS
NT seq 819 nt   +upstreamnt  +downstreamnt
gtgcggctggccacctggaatgtgaactcgattcgctcccggctgccccgggtgctggac
tggctggcccgcaccgaggtcgacgtgctggccatgcaggagaccaagtgcgccgacggc
cagttcccgacgttgccgttcttcgaactcggctacgaggtcgcccacgtcggcttcaac
cagtggaacggtgtggcgatcgcctcccgggtcggcctggacgacgtgcgggtcggcttc
gagggccagccgagctggagcggcaagccggaggtcgccgccgccgcggaggcccgcgcc
ctggccgccacctgcgccggtgtgcggatctggagcctctacgttcccaacggccgcgcg
gtgggcgacccgcactacgcctacaaactggattggcttgccgccctgcgtgattcggcc
gcggcctggctgcgcgaggatcccgccgcccagatcgcgctggccggggactggaacatc
gccccacaggacgacgacgtgtggagcatggagttcttcgccggcgccacccacgtctcc
gagccggagcggcgcgcgttcaacgccatcctcgacgcgcaattcgcggacctggtacgg
cctttcgcaccgggcccgggggtgtacacgtactgggactacaccgcgctgcggttcccg
aaacggcaaggcatgcgcatcgatttcatcctcggctcccccgcgttggcgcgccgcgtg
acgcacgcgcagatcgaccgcgaggagcgcaagggcaagggcgccagcgatcacgcgccg
gtgctggtcgatgtgagccgcgacgagccgccgtcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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