KEGG   Mycobacterium avium subsp. paratuberculosis E93: RE97_01715
Entry
RE97_01715        CDS       T03847                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
mavu  Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:mavu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mavu03009]
    RE97_01715
   03016 Transfer RNA biogenesis [BR:mavu03016]
    RE97_01715
Enzymes [BR:mavu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     RE97_01715
    5.4.99.29  23S rRNA pseudouridine746 synthase
     RE97_01715
Ribosome biogenesis [BR:mavu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RE97_01715
Transfer RNA biogenesis [BR:mavu03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    RE97_01715
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AJK78032
UniProt: A0A7U4ZM89
Position
405143..406015
AA seq 290 aa
MRPAPLPVRDGLGPARVRLRGGPVLAELTARFGAAARAKVLAAEVVTADGAVVDEATVLP
AGASVYLYRELPDEVVVPFDLPVLHRDDDIVVVDKPHFLATMPRGRHVAQTALVRLRREL
GLPELSPAHRLDRLTAGVLLFTARREVRGAYQTLFSRGLVDKTYLARAAVDPALVFPRVL
AGRIVKHRGRMQAVCEPGPPNALTEVELLSPDGLYRLRPRTGRTHQLRLQMASLGIPIIG
DPLYPNIIDVPADDFSTPLQLLAQRIEFDDPRTGARRVFVNRRTLDDPGP
NT seq 873 nt   +upstreamnt  +downstreamnt
ttgagaccggcgccgctgccggttcgcgacgggctgggacccgcccgggtgcggctgcgc
ggcggtccggtgctggccgagctcaccgcccggttcggcgccgcggcccgcgccaaagtc
cttgccgccgaagtggttaccgccgacggggcggtggtcgacgaggccaccgtgttgccg
gccggggccagtgtgtacctctatcgcgagctgcccgacgaggtggtggtgcccttcgac
ctcccggtgctgcaccgcgacgacgacatcgtcgtcgtcgacaagccgcactttctggcc
accatgccgcgcggacggcacgtcgcccagaccgcgctggtgcggctgcgccgggagctc
ggcttgcccgagctgagccccgcgcaccggctggaccggctgaccgccggggtgctgctg
ttcaccgcgcggcgcgaggtgcgcggcgcctatcagacgctgttctcccgcgggctggtg
gacaagacctatctggcccgggccgccgtcgacccggcgctggtgttcccgcgggtgctg
gccggccgcatcgtcaagcaccggggccggatgcaggcggtctgcgaacccgggccgccc
aacgcgctgacggaggtggagctgttgtccccggacggtctgtaccggctgcggccacgc
accggacgcacccatcagctgcgcctgcagatggcctcgctgggcataccgatcatcggt
gatccgttgtatcccaacatcattgacgtgccggccgatgacttcagcaccccgctgcag
ctgcttgcccagcgcatcgagttcgacgatccgcgcaccggcgcccgtcgcgtcttcgtc
aaccgccggaccctcgacgacccaggtccatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system