KEGG   Candidatus Methylopumilus turicensis: BN1209_1007
Entry
BN1209_1007       CDS       T03844                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
mbac  Candidatus Methylopumilus turicensis
Brite
KEGG Orthology (KO) [BR:mbac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbac03019]
    BN1209_1007 (orn)
   03009 Ribosome biogenesis [BR:mbac03009]
    BN1209_1007 (orn)
Messenger RNA biogenesis [BR:mbac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BN1209_1007 (orn)
Ribosome biogenesis [BR:mbac03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BN1209_1007 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like pP_pnuc_1
Other DBs
NCBI-ProteinID: CEN56048
UniProt: A0A0B7J057
Position
1:complement(986354..986902)
AA seq 182 aa
MANPNDNLIWLDMEMTGLLPDSDRIIELAVVVTDADLNVIAESPVIVVHQADEVLDGMDA
WNKGTHGRSGLIEKVKASTTNEEQATAQMLEFLKLHVPEGKSPMCGNSICQDRRFMARYM
PALEKYFHYRNLDVSTFKELARRWKPTIYSGFKKASKHEALADIYESIDELKYYREHFIK
LD
NT seq 549 nt   +upstreamnt  +downstreamnt
atggcaaatccgaatgacaatttaatctggcttgatatggaaatgacgggcttgttgcca
gattctgatcgtattatagagttggccgttgtggtgacggatgctgatctaaacgttatt
gccgagtcaccagtcattgtggttcatcaggctgatgaagtattggatggaatggatgct
tggaataaggggacgcatggtcgctctggtctcattgaaaaagttaaagcctctacaact
aacgaggaacaggcgactgctcaaatgttggagtttttgaagctgcatgtgccagaaggc
aagtccccaatgtgtgggaactctatttgccaagatcgacgtttcatggcgcgttacatg
ccagcgcttgaaaaatatttccattacaggaatcttgatgtgagtacttttaaagagctg
gctcgtcgttggaagcccaccatttattccggatttaaaaaagcgagcaagcatgaagca
cttgcagacatttatgagtctattgatgagctgaaatattaccgagagcattttattaag
ttggattaa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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