KEGG   Methanosarcina barkeri 227: MSBR2_1054
Entry
MSBR2_1054        CDS       T03914                                 
Name
(GenBank) Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (small subunit)
  KO
K16793  methanogen homoaconitase small subunit [EC:4.2.1.114]
Organism
mbar  Methanosarcina barkeri 227
Pathway
mbar00300  Lysine biosynthesis
mbar00680  Methane metabolism
mbar01100  Metabolic pathways
mbar01110  Biosynthesis of secondary metabolites
mbar01120  Microbial metabolism in diverse environments
mbar01210  2-Oxocarboxylic acid metabolism
mbar01230  Biosynthesis of amino acids
mbar01240  Biosynthesis of cofactors
Module
mbar_M00608  2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:mbar00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    MSBR2_1054
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MSBR2_1054
Enzymes [BR:mbar01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.114  methanogen homoaconitase
     MSBR2_1054
SSDB
Motif
Pfam: Aconitase_C
Other DBs
NCBI-ProteinID: AKB57570
UniProt: A0A0E3R0D2
Position
complement(1341026..1341535)
AA seq 169 aa
MSLIIGRVWKYGNNINTDEIIPGKYLRSKDIQIFAAHAMEGIDPEFTKKFRFGDIIVAGT
NFGCGSSREQAPLALKYAGVSCVIAKSFARIFFRNAINIGLPLIEVDIECQEGDKVKVDL
AKGEVIVSDKDTFRGNKLPDFLLEILNDGGLVAHRKKLQRKKNKTIIPG
NT seq 510 nt   +upstreamnt  +downstreamnt
atgagtctgattataggccgggtctggaaatacggaaacaacattaatactgatgaaata
atcccgggtaagtatttgcggagcaaagatatacagatctttgcagctcatgcaatggag
ggaattgacccggaattcacaaaaaagttcaggtttggagatatcattgttgcaggcact
aacttcggctgtgggtcttcaagagagcaggctcctcttgccttgaaatatgcaggagtg
tcatgtgttatagcaaagtcttttgcaaggatctttttcagaaatgcaatcaatatcggg
ctacctctcatagaagttgatattgaatgccaggaaggagataaagttaaagttgatctg
gccaaaggtgaagttatagtctcagacaaagacacattcaggggaaataaactgccggat
ttccttcttgagatactcaacgatggtggacttgtagctcatagaaaaaaactccagaga
aagaaaaacaaaacaattataccaggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (8)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (10)   
   KEGG ENZYME (1)   
   KEGG REACTION (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system