KEGG T05066: MEBOL

Melittangium boletus: MEBOL_005825

Entry

MEBOL_005825      CDS       T05066

Name

(GenBank) RNA-splicing ligase RtcB

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

mbd Melittangium boletus

Brite

KEGG Orthology (KO) [BR:mbd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mbd03016]
    MEBOL_005825
Enzymes [BR:mbd01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     MEBOL_005825
Transfer RNA biogenesis [BR:mbd03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    MEBOL_005825
Prokaryotic type
   tRNA splicing ligases
    MEBOL_005825

SSDB

Motif

Pfam:

RtcB DUF4880

Other DBs

NCBI-ProteinID:

ATB32348

UniProt:

A0A250IM54

Position

7024790..7026025

AA seq 411 aa
MKTQRDYEVLTNEAGGVPIKAWTVGVPFEDEAKKQLRAMATLPFVHKWVAAMPDVHRGFG
ATVGSVVATAGAVIPAAVGVDIGCGMIAVRTTLRAEQLPDSLAGVRSAIERTVPHGRTDN
GGRNDKGAWREAPAAHQEAWARLKPGYDAILEKHPRLGRGPDLGHLGTLGTGNHFIEVCL
DEAGHVWVMLHSGSRGVGNRIGSHFIELAKEEMSRFFIHLPERDLAYLPEGTVHFQDYLH
AVSWAQDYAATNRELMMRSAVEALKASGELPEFSLTDAAVNCHHNYVSREHHYGKNVLVT
RKGAVRAREGDLGIIPGSMGARSYIVRGKGNPESFHSCSHGAGRVMSREAAKRHFSLEDH
ARATAGIECRKDADVIDETPGAYKPIDAVMAAQAGLVDIVHTLRQVVCVKG

NT seq 1236 nt +upstreamnt +downstreamnt
atgaagacccagcgcgattacgaagtcctgacgaacgaggcgggtggggtgcccatcaag
gcgtggacggtgggggtgccgttcgaggacgaggccaagaagcagctccgggccatggcg
accctgcccttcgtccacaagtgggtggcggcgatgccggacgtgcaccggggcttcggt
gcgacggtggggagcgtggtggcgaccgcgggcgcggtgattcccgccgcggtgggcgtg
gacatcggctgcgggatgatcgccgtgcgcaccacgctgcgcgcggagcagttgccggac
tcgctcgccggggtgcgctcggccatcgagcgcacggtgcctcatggccggacggataac
ggcggccgcaacgacaagggcgcctggcgcgaggcccccgctgcccaccaggaggcctgg
gcccggctgaagcccggctatgacgccatcctcgagaagcacccgcgcctgggccgtggc
ccggacctgggtcacctcgggacgctcgggacgggaaaccacttcatcgaggtgtgcctg
gatgaggccggccacgtgtgggtgatgttgcacagtggttcgcgcggtgtgggcaaccgc
atcggaagccacttcatcgagctggcgaaggaggagatgagccgcttcttcatccacctg
ccggagcgggatctggcgtacctgcccgaggggacggtgcacttccaggactacctgcac
gcggtgagctgggcgcaggactacgcggccaccaatcgcgagctgatgatgcgctcggcg
gtggaggcgttgaaggcgagcggggagctgccggagttctcgctcaccgacgcggcggtg
aactgccaccacaactacgtgtcgcgcgagcaccactacggaaagaacgtgctcgtgacg
cgcaagggggcggtgcgggcgcgggaaggggacctgggaatcatccccggcagcatgggg
gcgcgctcgtacatcgtgcgcggaaagggaaacccggagtccttccattcgtgcagccac
ggcgcgggccgggtgatgtcgcgcgaggccgccaagcggcacttctcgctggaggaccac
gcccgggcgacggcgggcatcgagtgccgcaaggacgcggacgtcatcgacgagacgccc
ggggcctacaagcccatcgatgcggtgatggcggcgcaggcggggctggtcgacatcgtt
cataccctgcgccaggtggtgtgcgtgaaggggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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