KEGG   Drepanopeziza brunnea: MBM_01137
Entry
MBM_01137         CDS       T03105                                 
Name
(RefSeq) LSM domain-containing protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03040  Spliceosome
mbe04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MBM_01137
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    MBM_01137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_01137
   03041 Spliceosome [BR:mbe03041]
    MBM_01137
   03032 DNA replication proteins [BR:mbe03032]
    MBM_01137
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     MBM_01137
Spliceosome [BR:mbe03041]
 Complex A
  U1 snRNP components
   Sm proteins
    MBM_01137
  U2 snRNP components
    MBM_01137
 Complex B
  U1 snRNP components
    MBM_01137
  U4/U6.U5 tri-snRNP components
    MBM_01137
 Complex C
  U2 snRNP components
    MBM_01137
DNA replication proteins [BR:mbe03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     MBM_01137
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 18757072
NCBI-ProteinID: XP_007289026
UniProt: K1WS32
Position
Unknown
AA seq 115 aa
MTSTIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDGRVSHL
DQVYIRGSHVRFFIVPDMLRYGPCSQLYCFYPSFMLSITENRLTRELQKRADVQK
NT seq 348 nt   +upstreamnt  +downstreamnt
atgacgagcacgatcgggatccccatcaagctgctgaacgaagcgcagggccatgtcgta
acgctggagattacatctggacaggtctaccgtggcaagctgctcgaagctgaggacaat
atgaatgtgcaattgaaggatatcactgtcacggcgcgcgatgggcgggtcagccacttg
gatcaggtctatattcggggatcgcatgtgcggttctttattgtgcctgatatgcttcgg
tatggtccctgctcccagctctactgcttctatccctccttcatgctttcaatcacggaa
aaccggctaacgcgtgagctgcagaaacgcgccgatgttcagaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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