KEGG   Drepanopeziza brunnea: MBM_02707
Entry
MBM_02707         CDS       T03105                                 
Name
(RefSeq) transcription initiation factor TFIID complex 60 kDa subunit
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MBM_02707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbe03021]
    MBM_02707
   03036 Chromosome and associated proteins [BR:mbe03036]
    MBM_02707
Transcription machinery [BR:mbe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MBM_02707
   Coactivators
    SAGA/TFTC/STAGA complex
     MBM_02707
Chromosome and associated proteins [BR:mbe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     MBM_02707
    STAGA complex
     MBM_02707
    TFTC complex
     MBM_02707
    SAGA complex
     MBM_02707
    SLIK complex
     MBM_02707
SSDB
Motif
Pfam: TAF6_C TAF Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 18758642
NCBI-ProteinID: XP_007290596
UniProt: K1WP76
Position
Unknown
AA seq 459 aa
MADQKLVWNPDNIRDVAESVGISALNEDAVRTLANEVEYRLSQVIVEAMRFMHQGKRTVL
GTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLYYIEDEEVDFEKLINAPLPKV
PRDVSFTAHWLAVEGVQPLIPQNPSTAEARADASVAKGPGANPTLAALAGNDNVPGKPLV
KHIVSKEMILFFDKIKAAILDESLDPEVVLLRNTAFQSVRSDPGLAQLVPYFLQFVAEKV
THSLGNLFVLRQMIELTQAVIENKSHYADPYALSLTAPIVTCIIGRNLGGEAAHLKDQYE
VRDLAVSLLGQVVRKYSTSSTMLKAKLTRTFLKNFLDPAKPLDVHYGAMCGLATVGGPNA
ISALILPTLKKYDEEILSRAQNELGPSNERVLMMTAALVKAVMSLVDSPPAAETNGTNGN
AAEGQLIEDYLGPIIGGRVAALGNHKLNEAVLKSREQPS
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcggaccaaaagctggtctggaatcctgacaacatacgcgatgtcgccgaatctgtc
ggcatatcagccttgaatgaagatgccgttcggactttggcgaacgaagtggaatacagg
ctcagccaggtcatcgtggaggccatgcgattcatgcaccagggaaagaggacggtgctg
gggacccaggatatctcccaggcgctgaaagtgctggacgtggaaccgctatatggctat
gagtctaccaggccgctgagatttggggaggcctcgctggggccaggacaaccgctgtat
tacatcgaagatgaggaggttgactttgagaagttaatcaatgcgccgcttccgaaggtc
ccgagggatgtctcgtttactgcacactggcttgcggtcgaaggtgttcagcctttgata
ccgcagaacccaagcacagcagaagctcgcgcggacgcatcagtagccaaaggaccaggt
gcaaacccaaccctggcagcccttgcaggcaacgacaatgtccctggcaagccgctggtc
aagcatattgtctctaaggaaatgatcctcttcttcgacaagatcaaggcggctatcctt
gacgaaagtctcgatccagaagtcgttcttctacgaaataccgccttccaaagcgtccgt
tcagatcccgggctggcccagctcgtcccgtactttctccaattcgtcgccgagaaagtc
actcattccctcggcaacctcttcgtcctccggcagatgatcgagcttacccaagccgta
atcgagaacaaatctcactacgccgacccgtacgcactctcgctcaccgctcccatcgtc
acctgtatcatcggacgtaatctaggcggcgaggccgcacacttgaaagatcaatatgaa
gtccgagacctcgccgtatcgctgctcggtcaggtcgtccgcaaatactctacctcgagc
acgatgctcaaagccaaactcaccaggaccttcctcaagaacttcctcgatcccgcgaaa
ccactagatgtccactatggagcaatgtgtggtctcgctaccgtcggcggccctaatgca
atctcagcgctcatcctcccaactctcaagaaatacgacgaggagatcctatccagagcc
caaaacgagctcgggccaagtaatgagcgagtcttgatgatgactgcagccctcgtgaaa
gcagtcatgagcctagttgacagtccacccgccgcagaaacgaatggcacaaacggcaac
gcggcggaggggcagctgattgaggactacctaggccctataatcggtggacgggtcgct
gcgctgggaaaccacaagctgaacgaagcggtactgaagtcgagggaacaaccatcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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