KEGG   Drepanopeziza brunnea: MBM_03019
Entry
MBM_03019         CDS       T03105                                 
Name
(RefSeq) tetratricopeptide
  KO
K12600  superkiller protein 3
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MBM_03019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbe03019]
    MBM_03019
Messenger RNA biogenesis [BR:mbe03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     MBM_03019
SSDB
Motif
Pfam: TPR_19 TPR_22 TPR_16 TPR_1 TPR_2 TPR_8 TPR_17 TPR_14 TPR_12 TPR_11 TPR_9 TPR_7 T7SS_EccA1_N Fis1_TPR_C ANAPC3 E_motif
Other DBs
NCBI-GeneID: 18758954
NCBI-ProteinID: XP_007290908
UniProt: K1X187
Position
Unknown
AA seq 1423 aa
MSKSKGAKESLKAIVASVKAQKYDDAVQEAQNLLASDPKNYQASIFLGFCYSKQNKLAEA
ETAYDAATKIKDSDPQAWQGLIQLYEKGSNQKLPAYFTAALRLAQIYEAADDKYKCQSVV
DAFLLFAKSQGTRLQYKKAQEIVLPTSPIYSYLEGRIPHPAHTYQIIAQITEFEEKERIN
TQIGERRTRLGAKIGQVTAEVKREVLKDSDLEDIYEQIIDWSNEDEIRRQYEEKLIQRCV
EALTVLPPGQDKIEKRNKAIKLATDMVIIKHPYKLAWDIAIEWKDAENIRDLDVTVLREY
YAFFPTAGLAQVLRGFLSSEISPFPPPPPLAHKFEMAGSDESEDDDDDSGGVSLDGPMPA
EDRLLLMSDGMADAGKSILAHRLMGEYYQFLEEYETVADLMRNGRRLVEEESSKTALKFE
HSSDAMTALLGTALVYYQSPKNHLEAKTLFDGLLERKPTSTPALIGVGLIYEEKEDYPAA
IDFLGRALQRDPKNIRVKTEAAWVKALNGDFDRGRDELEDCLAQINSKDLRNKDLVAQTQ
YRIGICIWNIDTSKAARKDRNGAYAYFLAALKSNLNYAPAYTSLGIFYADYLNDKKRSRK
CFQKAFELSASEVEAAERLARIFAEQGEWELVEVVAQRVVDSGKVRPSPGSKKKGISWPF
AALGVAELNKQDYARSIVSFQSALRITPNDYHSWVGLGESYHNSGRYIAATKAFQHAENF
EHEVTQQNSGQTWFAKHMLANVKRELGDYDDAIEGYKAVLTDRPAEFGVSIALIQALVES
AWDGIDKGLFGYAAGRAAETIDAALALASSRSDAFNLWRAVGDACSVFSWNQSRMSDFPH
AKMKELLKTGHAKDAYGIFADVDGVGIDVVFADGLYAKDEVEGLNLTRCLHASVLAHKRA
VHASAQDIHAQAVAYYNLGWAEHRTHVCLCAGIKKRSTRYLKAAVLCFKRAIELEAGNSE
FWNALGVVTSELNPRVAQHSFIRSLFLNERSSQAWTNLGTLYLLQNDYELANEAFTRAQS
TDPDFAHAWIGQGLLALLLSGDIQEANLLFTHAMEISESSSLITKKQYSQSTFDQLFLSK
SSSSITDFVQPLFALKQLQSMDPNDVMYQHLSTLFLERIGDLDLALEALSKICATVEADY
EVTESVASLSRFALAKADLARSQLAAGLYEEAIENGDTALQLSDEDAGNELTAESRQRCR
LSAHLTVGLAQYYSEDPEAALQYFLPALEESNGNPDAVCLLAQVLWAKGDDDSRESARDH
LYTCVDTHPEHVQCVLLLALIALLDNNALQDVTVRLQDLRTTHTTTDLEQSQVSELLSAT
AALSQKDTEKEVLTEIQTDILLHPGQPYGWNRLAEVEGDEHTADVALMTATKGVPPKGAL
NAEDLAYTFAGTGKVGDAQRAIVVAPWSAEGWDKLGAAAAGRG
NT seq 4272 nt   +upstreamnt  +downstreamnt
atgtcaaaatcgaagggagctaaggaatcgctgaaagctatagtagcttcagtcaaggct
cagaaatacgatgacgctgtacaagaagctcagaacctgctggcatcggatcccaagaac
taccaggcgtcgatattcctgggattctgctacagcaaacagaacaagctcgcagaagcc
gaaacggcatacgatgctgcaacgaagatcaaagactccgatccacaagcctggcaaggg
ctcatccaactgtatgagaaaggaagcaaccagaaacttcctgcatactttaccgcagcc
ttgagattagcccaaatttacgaagctgcagacgataagtataagtgtcagtctgtggtg
gatgcgttcctcttgttcgccaaaagccaaggcacgcggcttcaatacaagaaagcccag
gagatagttcttcctacaagtccaatctacagctacctggagggcagaatcccacatccc
gcccatacgtaccagatcatagcacagatcaccgaatttgaagagaaggagcggatcaac
acgcagattggtgagcgaagaaccagactcggtgctaaaattggccaggtcactgctgaa
gtcaagcgggaggtgttgaaggacagtgatttggaggatatctacgagcagattattgac
tggagcaatgaggatgagatccggcggcaatatgaggagaagcttatacagagatgtgtc
gaggcactaactgtgcttcctcctggccaagacaaaattgagaagcgcaacaaggctata
aagctggccactgacatggtcattataaagcacccttataagctggcatgggacattgca
attgaatggaaagatgccgagaacatccgagatctggatgtcactgtgctacgagaatat
tacgccttttttcccactgccggtcttgcccaggttttacgaggattcttaagcagcgag
atatcaccctttccaccgccaccccctcttgcacataaatttgaaatggctgggtctgac
gagagtgaagatgatgacgacgacagtggaggggtatctctggatggtcctatgccagcc
gaggatcgtctacttctgatgtctgacgggatggcagacgcaggaaagtcgattcttgca
cacagactgatgggtgagtactatcagttcctcgaagaatacgagactgtcgcagatctc
atgcgaaatggccgaaggctagtagaggaagagtccagcaaaactgccttgaagttcgaa
cactcttctgatgcaatgactgccctcctgggtactgctcttgtttactaccaatccccc
aaaaaccacctagaagctaagacattgttcgatggtctcctggagcggaagcctacgtcg
acgccagctttgattggtgtgggcttgatctacgaagagaaggaagactaccctgcggcc
atcgacttcctaggccgtgcacttcagcgtgacccgaagaacattcgcgtcaagactgaa
gcagcctgggtcaaggctctaaatggtgacttcgatagaggcagagacgagcttgaagac
tgcttagctcagatcaacagtaaggaccttcgaaataaagacttggttgctcagactcaa
tatcgtattggaatttgtatctggaatatcgatacctcaaaggccgcgcggaaggacagg
aacggtgcttatgcctatttcttggctgctctgaaaagcaatctgaactatgcacctgct
tataccagtcttggtatcttctacgccgattacctgaatgacaagaaaagatcccgaaag
tgtttccagaaggcatttgaactttcagcctcagaagtagaggctgctgagcgacttgcc
agaatcttcgctgagcaaggggagtgggagcttgttgaggttgtggctcagagagtagta
gactctgggaaggtacggccatcacctggttcaaagaagaagggtatcagctggcctttt
gcagctttgggagtggcggagctaaacaagcaagactatgccaggagtatcgtctctttc
cagtccgccctccgaatcacacctaatgactatcattcctgggttggtcttggcgagagc
tatcacaactctggtcgatacattgcagccaccaaggcattccagcacgcagaaaatttt
gaacacgaggttacgcagcaaaactcaggtcaaacatggttcgcgaagcacatgcttgcg
aatgtcaagcgagaattgggggactacgatgatgctatcgaaggatacaaagccgtactc
acagaccgacctgccgagtttggagtttccattgccctgatccaggccctcgtagagagc
gcatgggatggaatcgataaaggtttgttcggatacgctgccggacgagcagccgagacg
attgatgccgctcttgcacttgcatcgagcagatccgatgcttttaatctttggagggca
gtaggagatgcttgttcagtcttctcctggaatcagagtcgcatgtcagactttccacat
gcgaaaatgaaagaactcttgaaaactggccatgcgaaagatgcctatggtatctttgca
gatgtcgatggggttgggatcgatgtggtatttgcagacggactctacgccaaggatgag
gttgaagggctgaacttgacacggtgcctacacgcttcggtgcttgctcacaagcgagca
gtacatgcctcggcccaagatattcatgcccaggctgttgcatactacaatctaggttgg
gcagagcatcgaacccatgtttgtttatgtgctggtatcaagaagcgatccacgcggtat
ctcaaggctgctgtgctgtgcttcaaaagagccatcgagctcgaagccggtaattctgaa
ttctggaatgctctcggtgttgtcaccagcgagctgaatcccagagtcgcccagcattct
ttcatccggagcctgttcttgaatgaaagaagctcacaggcctggacgaatctcggtact
ctgtatctgctacagaacgactatgagttggcaaatgaagctttcacgcgagctcagtcc
accgatccggactttgcacatgcctggattggacaaggcctgctagcattgctgctcagt
ggcgatattcaggaagcgaatcttcttttcacgcatgccatggaaatttccgagtcgtct
tcactgatcactaagaagcagtactcgcaatctacgtttgatcaattatttttatcaaaa
tcctcttccagcattacagattttgttcagccattattcgcgctcaagcagctgcagtcc
atggacccgaacgacgttatgtatcaacatctttcgaccctcttcctagaacgcatagga
gacctcgatctggctctggaagcactctccaaaatctgcgcaaccgtcgaagccgactac
gaggtcacggaatcagtagcttctctatcccgtttcgccctcgccaaagcagaccttgct
cgctcccagctagccgccggtttgtacgaagaagcaatcgaaaacggcgatacggcactg
caactcagcgacgaagacgccggtaacgagctcacagccgagtcccgccaacgctgcagg
ttgtccgcacatctcactgtaggcctcgcccaatactactccgaagaccccgaagccgct
ctccagtactttcttcctgctctcgaggagtccaatggtaaccctgatgctgtatgcctc
ctcgctcaagtcctctgggccaaaggcgacgatgactcgcgcgaatcagcacgagaccac
ctctacacgtgcgtcgacacgcatcccgaacacgtccaatgcgttttacttttagcactc
atcgcgctactcgacaacaacgctctccaggatgtcacagtccgcctccaagacctgcgc
acaacgcacacaaccaccgacctcgaacaaagccaagtctctgaactcttgagcgctacc
gccgccctctcccagaaagatacagagaaggaggtattgacggagatccagacggatatc
ctcttgcaccccggacagccttatggatggaatcggctggctgaggttgagggtgacgag
cacacggctgatgttgcgctaatgacagctactaagggtgtacctcccaagggtgcgtta
aatgcagaggatttggcctacacgtttgccgggacggggaaggtcggagatgcgcagagg
gcgattgtggttgcgccgtggagtgctgaggggtgggataagctgggtgcggcggcggct
ggaaggggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (54)   

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