KEGG   Drepanopeziza brunnea: MBM_06949
Entry
MBM_06949         CDS       T03105                                 
Name
(RefSeq) DNA repair helicase rad25
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mbe  Drepanopeziza brunnea
Pathway
mbe03022  Basal transcription factors
mbe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MBM_06949
  09124 Replication and repair
   03420 Nucleotide excision repair
    MBM_06949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbe03021]
    MBM_06949
   03400 DNA repair and recombination proteins [BR:mbe03400]
    MBM_06949
Enzymes [BR:mbe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MBM_06949
Transcription machinery [BR:mbe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MBM_06949
DNA repair and recombination proteins [BR:mbe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MBM_06949
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD
Other DBs
NCBI-GeneID: 18762884
NCBI-ProteinID: XP_007294838
UniProt: K1X1Q1
Position
Unknown
AA seq 839 aa
MPVKRKAPSSASGSKKAGKDTEASTPGPATPRSISGSDEDYESEVTEEESETVKKAKANL
SVSKYQQKRGSSFLRGRDSASHHFEGGNHDFSYLSLKPDHHNRPLWIDPLKGKIIMESFS
PLATEAQDFLTTVAEPQSRPQFLHEYSLTPHSLYAAVSVGLDPKDIISVLDKLSKVPIPG
SIREFITGCTHSYGKVKLVLKNTKHFVESSDPEMLQRLLKDAVIGPLRVHGTEDITTTSA
PKMGALVIPGTKNAAGVQQAGDQPGKSQQPKDGENANQEDIYAKLNEDDDDEDEADAVHA
FEIADEGVETIQKRCLELGLPVLEEYDFRNDDANANLDIDLRPIAQIRHYQEKSLSKMFG
NGRAKSGLIVLPCGAGKTLVGITAACTIKKGVIILCTSSMSVVQWRQEFLKWCNINPNDI
AVFTSDNKDRFTGNTGIIVTTYNMVAQQGKRSYDSQKMMDFLTSREWGLMILDEVHVAPA
HMFRRVTSIIKTHSKLGLTATLLREDDKISDLNFLIGPKLYEANWMELAEQGHIARVQCA
EVWCPMTTEFYTEYLNQSSRNKSLIWIMNPRKFQACQYLINYHEKRGDKIIVFSDNVYAL
KMYAQKLNKVFIYGETGNTERLRILENFQHNSNINTLFLSKIGDTSLDLPEATCLIQISS
HFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTLEMVYSSKRQAFLVDQGYAFKV
ITHLQGIENLPDLAFTTPAERRELLQNVMIHNEAGGDDYEDGDDLFHRVDGEMGRKKKKK
KGARRTAGNLSELAGGSDMAYVEMNRSRNKDLKKKKGESSAFFKKIQREQVKRKAAMDS
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgcctgtgaagagaaaggctccatcgagtgccagcggcagcaaaaaagccggcaaagac
accgaagcctcgacgcctggtcccgccaccccgcgcagcatcagcggtagcgacgaagat
tacgagtctgaagtgacggaggaggaatcagagacggtcaagaaggcgaaggcgaacctc
agcgtcagcaaataccagcagaagaggggaagttcgttccttagggggcgagactccgcg
tctcaccacttcgagggcgggaatcatgatttttcatacctgtcgctgaagccggatcat
cataatcgcccgctgtggatcgacccgttgaaggggaagatcatcatggagagtttctcg
ccgttggcgacagaggcgcaggatttcttgacgacggttgcggagccccagtccaggccg
cagtttctgcacgagtattctttgacgccgcatagtctttatgctgcggtgtcggttggc
ctggacccgaaggatatcatcagtgtgctggacaagctgtcgaaggtgcctataccgggc
agtatccgcgagttcattacaggatgtacccacagctacggcaaggtcaagctggttctg
aagaataccaagcattttgtggagagttccgacccggagatgttgcagcggctgctaaag
gatgcggtgattgggccattgagggtgcatggcacggaggacatcaccacgacttctgct
cctaagatgggtgccttggtcattcctggtacgaagaacgcggctggtgtacagcaagcc
ggagatcagcctggaaaatctcagcagcccaaggatggcgagaatgcaaaccaggaagac
atatatgccaaattgaacgaggatgatgatgacgaagacgaagccgatgctgtgcatgcc
tttgaaatcgctgatgaaggtgtggaaacgattcagaagcgctgtctagagttgggattg
cccgtcttggaggagtacgacttccgcaacgacgatgcgaatgccaatctcgatattgac
ttgaggcctattgctcagatcagacattatcaagaaaagagcttgagtaaaatgtttggt
aacggtagagccaagagtggtcttatcgttctaccctgcggtgctggcaagactttggtt
gggattaccgctgcttgcacaatcaaaaagggtgttatcattctttgcaccagttcgatg
tccgtggttcagtggaggcaggaattcctgaaatggtgcaatattaaccccaatgatatt
gccgtctttacgtccgacaacaaggataggttcactggaaatactggtatcattgttacg
acatacaacatggttgctcagcagggcaagcgatcgtacgattcccaaaagatgatggac
tttctcacaagcagagaatggggtctgatgattctcgatgaggtccacgtcgcgccggct
cacatgttcagacgagtgacatccatcatcaagacgcactcgaagctaggtctaacagcc
actctgcttcgtgaggacgacaagatcagcgatctgaactttctgatcggacccaagctc
tacgaagctaattggatggagctagcagaacaaggtcacatcgcccgagttcaatgcgcc
gaagtctggtgtcccatgactacagaattctacactgaatacctcaatcaatccagccgt
aataaatctctcatctggatcatgaacccgcggaaattccaagcctgccaatacctcatt
aactatcacgagaagcgtggcgataaaatcatcgtcttctctgataacgtctacgccctg
aagatgtacgcgcaaaagctcaacaaagttttcatctacggcgaaaccggcaataccgag
cgtctgcgtatcctggagaatttccagcacaacagcaacatcaatactctcttcctatcc
aagatcggcgacacgtcgcttgatctccctgaggctacatgcctcatccaaatctcttcg
cattttggctctcgacgtcaagaggctcaacgactgggtcgaattttgagagcgaagcgt
aggaatgacgaaggctttaatgcattcttctactccctcgtctccaaagatacgctcgaa
atggtctactcctccaaacgccaggcctttctcgtcgaccaaggctatgccttcaaagtc
atcactcacctccaaggcattgagaacctgcccgacctcgccttcacgacccccgccgag
cgccgggaactcctccaaaatgtcatgatccataatgaagccggtggtgatgattacgag
gatggggacgatttgttccatcgcgtcgatggcgagatgggacgtaagaagaagaagaag
aagggagcgagaagaaccgccgggaatttgagcgagttggcgggtggaagcgacatggca
tatgtggagatgaatcgcagtcggaacaaggacttgaagaagaagaaaggggagagtagt
gcctttttcaaaaagatccaacgggagcaggtcaagaggaaggcggcgatggattcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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