KEGG   Candidatus Melainabacteria bacterium MEL.A1: BHV42_05845
Entry
BHV42_05845       CDS       T04546                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mbf  Candidatus Melainabacteria bacterium MEL.A1
Pathway
mbf03410  Base excision repair
mbf03430  Mismatch repair
mbf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mbf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BHV42_05845
   03430 Mismatch repair
    BHV42_05845
   03440 Homologous recombination
    BHV42_05845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbf03400]
    BHV42_05845
DNA repair and recombination proteins [BR:mbf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BHV42_05845
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BHV42_05845
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BHV42_05845
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 ssDNA-exonuc_C
Other DBs
NCBI-ProteinID: AOR38761
UniProt: A0A1D7YT88
Position
complement(1198762..1201101)
AA seq 779 aa
MKEWIFNKYDGNDKSLIARLLHSRGIKTDEEIYEFLHPLETKIIHPKAFCDMDKVVERLS
TAIDNGEKIVIHGDFDADGVTSTSLLYRTFKYLGADVNYFIPDREKEGHGFDTKALVKIM
TQVKPKVIISCDCGISDVDAVNFLNSFKIDVIITDHHEAPEVLPKAYGIINPKAPDALDE
NLTTKQIESLTSLAGVGVAFKTAHALLEKYNKLEFVSEILPYVAVGTVADIVPLIGENRY
LVTKGLELISAGKHYGITRLLESAGYKGQITSEQIAFGIAPRINASGRLDTVDAALKVLI
SDNKQEIEMAIQSLNEFNKIRQELCQNIFAEADEMVKKEGNRNPAIVLFNKEWHIGIIGI
VASMLVEKYYKPTFLMTYSDETKQFRCSARSVEGINLYDTISINSELFDGFGGHAMAAGL
AFSEEKSSFEQVKSALCKTVKEMSQGKDLKPFLNIDLELTPDDITLDLIDDISQLEPFGA
SNPSPIFAIKNLKIKEKRLMGENKNHLRLTCQVGNTEFNCIRWKDGDISLVKGDTIDIAF
HPQKNEYNGVTSVQLIIDDIHSEYLKEEELPKQKLYDHRKKTDILPQVNDYVKSSKQNIL
IFAESKPILDKLKPFDALYARTITRDSLRPCDTLMLFDYPADKETFDKILNQTTPLSIHF
MNYDLKYMDEEEFLKTVCKMLKFACHNNNGKVELRRCASFLGKSYKVFELLFSIFDDIGL
IKIKEQNQNYYVIDFVGEITDLPKVLHSDKYTILTDLIAECEEFQKSLLEDDIFSLLHT
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgaaagagtggatttttaataaatatgatggtaacgacaaatctttgattgcaagactt
ttgcattcaagaggaattaaaactgatgaggagatttatgagtttcttcatccattagaa
actaaaataatccatccgaaagctttttgcgatatggataaggttgtggaaaggctttct
actgcaatagataatggcgaaaaaattgttattcacggtgattttgatgctgatggtgtt
acttcaacatctcttttatacagaactttcaagtaccttggtgcggatgtaaattatttt
atccctgatagagaaaaagaaggtcacggttttgatacaaaagcattagtaaaaataatg
acacaagttaaaccaaaagttataatttcttgcgactgcggtatttctgatgttgatgca
gtgaattttttgaatagttttaaaatagacgtaattattactgatcaccacgaagctcca
gaagttttgccaaaagcttacggaattattaacccaaaagctcctgatgcgttagatgaa
aaccttacaacaaaacaaatagaaagtcttacatctcttgcaggagttggagttgcattt
aaaactgctcacgctctattagaaaaatataacaagttggagtttgtatctgaaattctt
ccttatgttgcagtcggaactgttgccgatattgttcctttaattggtgaaaacagatac
cttgttacaaaggggttagaattgatttctgccggaaaacattacggaataacaaggttg
ttagaaagtgcaggatataaaggtcagattacttcagaacaaatcgcatttggaattgca
ccacgtataaacgcatcaggcaggcttgatactgttgatgcagctttgaaagttttaatt
tctgacaacaagcaagaaattgaaatggctattcaatctctaaacgaatttaacaaaatc
cgtcaagaactttgccaaaacatttttgctgaagctgatgaaatggtaaaaaaagaggga
aatagaaatcctgcaatagttctttttaataaagaatggcatattggtataattggtatt
gttgcatcaatgttagttgaaaagtattacaaaccaacatttttaatgacttattctgat
gaaacaaaacagttcagatgttctgcaagaagtgttgaaggaattaatctttatgatacg
atttcgataaattctgaattatttgatggttttggtggtcacgcaatggctgcaggatta
gcatttagcgaagaaaaatcttcttttgaacaagttaaatcagctctttgcaaaacagta
aaagaaatgtcgcaaggaaaggatttaaaaccatttttgaacatagatttggaactcact
cctgatgatattacgcttgatttgatagatgatatttctcaacttgaaccttttggagct
tcaaatcctagtccaatttttgctattaaaaatttaaaaatcaaagaaaaaagattgatg
ggtgaaaataaaaatcatttgagattaacttgtcaagtcggtaatacagaatttaattgt
attcgttggaaagatggtgatatttctttggttaaaggtgatactatagacattgctttt
cacccgcaaaagaatgagtataacggagttacaagtgttcagcttattatagatgatatt
cattcagagtatttaaaagaagaagaactcccaaaacaaaaattgtatgatcaccgtaaa
aaaacagatattttgccacaggttaatgattatgtaaaatcatctaaacaaaatatattg
atttttgcggaaagtaagccaattcttgacaaattaaaaccatttgatgcgttgtatgca
agaactattacaagagatagtttaagaccttgtgatacactgatgttatttgattatcca
gcggacaaagaaacatttgataaaattttgaaccagacaacccctttatcaatccatttt
atgaactatgatttgaaatatatggatgaagaagaatttttgaaaacggtttgcaaaatg
ttgaaatttgcttgccataataataatggaaaagttgaattacgccgttgtgcaagcttt
ttaggtaaatcttataaagtttttgaacttttattttcaatatttgatgatattggatta
ataaaaataaaagaacaaaaccaaaattattatgtcatagattttgttggtgaaataact
gacttgcctaaagttttgcattcggataaatatacaatactgactgatttaatagcagaa
tgcgaagaatttcaaaaatcattattagaagatgatatattttcattgttgcacacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (80)   

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