KEGG   Candidatus Melainabacteria bacterium MEL.A1: BHV42_08045
Entry
BHV42_08045       CDS       T04546                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mbf  Candidatus Melainabacteria bacterium MEL.A1
Pathway
mbf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BHV42_08045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbf03400]
    BHV42_08045
DNA repair and recombination proteins [BR:mbf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BHV42_08045
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BHV42_08045
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N RsgA_GTPase AAA_29 AAA_16 nSTAND1 nSTAND3 AAA_25 NACHT AAA_22 DUF815 AAA_23 DnaJ_CXXCXGXG ExoX-like_C
Other DBs
NCBI-ProteinID: AOR39169
UniProt: A0A1D7YUG8
Position
1633261..1636113
AA seq 950 aa
MLDTIIIKGAKEHNLKDVSLQLPKNELIVFTGVSGSGKSSLAFDTIFAEGQRRYIESLST
YARQFLGQMDKPNVDYIDGLSPAISIDQKSTSNNPRSTVGTVTEIYDYLRLLYARVGTPY
CPNCGEKIKPQTVDEIVSNIMKLPEGTKIQILAPVVRGKKGEYSSTFEELRQEGFVRVKV
DGEIYNLDEDEISLAKTKKHDISVVVDRIVVKTSAQSRIADSVQIALKKADGVAVVDVVG
EKGTPNKEIIYSEKLACPKCNLSFEELAPRIFSFNAPYGACERCSGLGADFVIDPNLIVP
DRKKSLNDGAIYPWSKTSTQYYNDVLKSVCHHFGIDMDKPFEDLTEAEQQIILYGSNDII
KFTVMRFGSHRYETKYRNFDGVIPFLEKRYNESNGEYWREEIEKYMTTTPCPDCNGARLK
PFPLAVKIKDKNIYEFTLMPIDEELDFISDLYLELNEFQMHIAKQILDEIRARLRFLKDV
GLSYLDLARRAGTLSGGEAQRIRLATQIGSGLSGVLYVLDEPSIGLHQRDNDRLIKTLIK
LRNLGNTLIVVEHDEDTIRNADYIVDIGPKAGLNGGNVIACGTVDDIIAAQASITGKYLS
GEKFIPVPEKIREGNGNFLRVKNAHINNLKNIDVDIPLGKIVCLTGVSGSGKSSLMQDLI
YEYALHKLRGNKPKPQGVDEIEGFENIDKIIAIDQSPIGRTPRSNPATYTDLFTHIRDLF
SKTNEAKLRGYKPGRFSFNVKGGRCEACKGDGVLKIEMNFLSDVYVKCDVCKGKRYNRET
LEVKYKGKTISDVLEMSVKEALEFFDSIPSIKSRLQTLNDVGLDYMKLGQSATTLSGGEA
QRIKLASELNKRSTGKTLYLLDEPSVGLHWYDLDKLIKILQQLADQGNTVLVIEHNLDFI
KIADYIIDLGPEGGIGGGQIIAQGTPSEVARCKQSYTGQYLKPMLTNSSK
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgctagacacgattattattaaaggcgcaaaagaacataatttaaaagatgtttcatta
caattaccaaaaaacgagttgattgtttttacaggtgtttcaggttcgggaaaatcttca
cttgcttttgatacgatttttgcagaaggacaaagacgctatattgaaagcctttcaacc
tatgcacgtcaattcttaggacagatggataaacctaatgttgattatattgatggtctt
tctcctgcgatttctattgaccaaaaatcaacaagcaacaatcctcgttcaactgttgga
acagttacggaaatttacgactatttaaggcttttgtatgctcgtgtcggaactccttac
tgtccaaattgtggagaaaagattaaaccgcaaactgttgacgaaattgtttctaatatt
atgaaactcccagaaggaactaaaattcagattttagctccggtcgtgagaggtaaaaaa
ggagaatattcttcaacgtttgaggaattaaggcaagaaggttttgtacgtgtaaaagtt
gatggtgaaatatacaatcttgatgaagatgaaatttcgcttgcaaaaactaaaaaacac
gatatttcagttgtcgttgatagaattgtagttaaaacatctgcgcaatctcgtattgca
gacagtgttcaaattgctttaaaaaaagctgatggtgttgcagtagtagatgttgttgga
gaaaaaggaactccaaataaagaaattatatatagcgaaaaactggcatgtcctaagtgt
aacttgagctttgaggaattagctcctcgtatattttcttttaatgcaccttatggagct
tgtgaaagatgttccggtttgggagctgattttgtaattgacccaaatttaattgttcct
gatagaaaaaaatctttgaatgatggggcaatttatccttggtcaaagacttcaacccaa
tattataatgatgttctaaaatctgtttgccatcatttcggtatagatatggacaaacct
tttgaggatttgacggaagctgaacaacaaatcattctttatggaagtaatgatattatc
aaatttacggttatgcgttttggttctcatcgttatgaaacgaaataccgtaattttgac
ggtgtaattccatttttagaaaaaagatataatgagtctaatggcgaatattggcgagaa
gaaattgaaaaatatatgacaacaactccttgccctgattgtaatggcgctagattaaag
ccgttcccgcttgcggtaaaaattaaagataaaaatatctatgaatttacgttaatgcca
attgatgaagagttagattttatttctgatttgtatttggaattaaatgaatttcagatg
cacattgcaaaacaaattttggatgaaattagagcaagattaagatttttgaaagatgtt
ggattaagttatcttgatttggctcgtcgtgccggaactttatccggtggagaggctcaa
agaatacgattggcaactcaaatcggtagtgggttgtctggagttttgtatgttttagat
gaaccttcaattggcttgcaccagagagataatgataggttgataaaaacccttataaaa
ctccgaaatctcggtaataccttgattgttgttgagcatgatgaagatacaataagaaat
gcggattatattgttgatattggtccaaaagctggtctaaatggtggaaacgttatagct
tgtggaacagttgatgatataattgcagctcaagcttctattaccggaaaatatttgagt
ggtgaaaaatttattcctgttcccgaaaaaattcgagagggaaatggaaattttttgagg
gtaaaaaatgctcatatcaataatttgaaaaacattgacgtagatattccgttaggtaaa
attgtttgcttgacaggtgtttctggatctggaaaatcttctttaatgcaagatttgatt
tatgaatatgcgttgcacaagttgcgaggaaataaaccaaagccacaaggtgtggatgaa
atcgaaggttttgaaaacatagataaaattattgcaatagatcaatctcctataggtaga
actcctcgttcaaaccctgcaacatatacggatttgtttacacatattagagatttgttt
tcaaaaacaaatgaggcaaaacttagaggttacaaacccggcagatttagttttaacgta
aaaggcggtcgatgtgaggcttgcaaaggtgatggtgttttaaaaattgagatgaacttc
ttatcagatgtttatgtaaaatgtgatgtttgtaaggggaagcgttataacagagaaaca
ttggaagttaaatataagggtaaaacaatttcggatgttcttgaaatgagtgtgaaagaa
gcgttagaattttttgacagtattccgtctataaaatcaaggttgcaaactttgaatgat
gtcggacttgattatatgaagcttgggcagagcgcaacaactttatccggtggtgaagct
cagcgaattaaactcgcatctgaattgaataaacgttctaccggcaaaactctttatttg
ttggatgaaccttccgttgggttgcattggtatgatttggataaactaatcaagatatta
cagcaattggcagatcaggggaatactgttcttgtaattgaacataatctggattttata
aaaattgcggattatattattgatttaggtccggaaggcggtattggcggtggacagatt
attgcgcaaggaactccttctgaagttgcaagatgtaaacaatcatacacaggtcaatat
ttaaaaccaatgttgacaaatagttcaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (80)   

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