KEGG   Methanoregula boonei: Mboo_0859
Entry
Mboo_0859         CDS       T00578                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mbn  Methanoregula boonei
Brite
KEGG Orthology (KO) [BR:mbn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbn03032]
    Mboo_0859
   03400 DNA repair and recombination proteins [BR:mbn03400]
    Mboo_0859
Enzymes [BR:mbn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Mboo_0859
DNA replication proteins [BR:mbn03032]
 Prokaryotic type
  DNA Topoisomerases
   Mboo_0859
DNA repair and recombination proteins [BR:mbn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Mboo_0859
SSDB
Motif
Pfam: Topoisom_bac HHH_5 Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: ABS55377
UniProt: A7I6L6
Position
835930..838758
AA seq 942 aa
MHLIVAEKNISAHRIAQILAGGTRVIEKKDAGVSTYSFGDTITVGLRGHVVEVDFEPGYE
NWRSEKYTPRSLIDAKTIKVPTEKRIVSLVQKLARHADRVTIATDFDTEGELIGKEAYEL
VRAVNKNVKIDRARFSAITAQEIGSAFANTTDLDFALAAAGEARQSIDLMWGASLTRFIS
LAAKRGGNNILSVGRVQSPTLSMIVDREKEIEKFVPEKYWQLGLLTEKAGEQIEARHTNG
RFKDQKAAELARDRTKEPLVVTEVREGTKQDRSPSPFDTTTYIVAAARLGFSAANAMRIA
EELYMNGYISYPRTDNTVYPASLDLNGVLATIRNSPFTKDVDWIISHRRAEPTRGKKSST
DHPPIYPTGVATREGIGDDAFRIYELVLRRFLATLAPDALWKTLKVNFEAGGETYTVTGG
LLLEPGWHAVYPFSEAKETILPAFVTGEKLPIRKVNLEEKETLPPARYTQSKLIQRMEEL
GLGTKSTRHEVIARLVSRKYIEGNPLRPTLVGRVVTEALEQNADTITKPEMTQTIESHMQ
QIKESKRTRDDVIAESRSMLHKAFDQLEANEQVIGNDIRDRTAEELNLGRCPACGGTLAI
KHMRGSTQFIGCSRYPECTFNIGLPVTQWGWAVRTDDICDKHHLHFVRLVRKGARPWDIG
CPLCHHISSNAESLTEIPSMDEALLEKARSKHIYTVAEIARSEPDALAKSLDLPLEKAGK
LKSEAGIVLEKLRRRSECRKFLRNHLIPRKGRSYAKIMEALGQSGVTDLASLAHATPATL
QQAGIGETEARDLLTEARLTHNSQLLKGTGIPAVSLKKYLEAGVSGPEDFVSTGAEKLAT
LTGMSTGTINRHLALVCEYLHRPVPLAVPKAKLAKGRKELLSVKGLAATTADKLIGAGVI
SGDLLLAADTKKLAASTGIDEEKLRGYQALMKKKKENAIIRI
NT seq 2829 nt   +upstreamnt  +downstreamnt
gtgcacctgatcgttgctgaaaagaacatctcggcccaccggattgcccagatcctggcc
ggaggtaccagggttatcgagaaaaaggatgccggggtatccacctacagttttggggat
actatcacggtggggctgcgcggccacgtggtggaagtggatttcgagcccggctatgag
aactggcgcagcgaaaagtacacaccccgcagcctgatcgatgcaaaaaccatcaaggtg
cctaccgaaaaaaggatcgtttcccttgtccagaaacttgcccgccatgcagaccgggtt
accattgccactgattttgataccgagggggaactgatcgggaaagaggcctatgaattg
gtgcgtgcggtcaataagaacgtaaagatcgaccgggcccggttctccgcgatcacagcg
caggagattggttctgcctttgcaaacacaactgaccttgattttgctcttgccgctgcc
ggcgaagcccgccagtccatcgatctcatgtggggcgcatcgctcacccggtttatatcg
cttgccgcaaagaggggaggcaacaatatcttatccgtgggccgggtccagagccccacg
ctctccatgatcgttgaccgggaaaaagagatcgagaagtttgtcccggagaagtactgg
cagctgggccttcttacggaaaaggcgggcgagcagatcgaggcccggcacacaaacggc
cgcttcaaggaccagaaggcagcagaacttgcccgtgaccggacaaaagaaccgctcgtg
gtaaccgaggtcagggaaggtacaaaacaggaccggtccccgtccccgttcgacaccacc
acctacattgttgcagcagcccggctgggtttttctgctgcaaatgcgatgcggattgcc
gaagaactgtacatgaacgggtacatctcgtaccccagaacggacaataccgtatacccg
gcatcccttgacctcaatggcgtgcttgccacgataaggaactcgccctttacaaaagac
gttgactggatcatttcccaccggcgggccgagcctacacgagggaagaaatcctctacc
gatcacccgccgatctatcccaccggtgttgccacccgggaagggatcggggatgacgca
ttccggatctacgaactggtgctgcgccggtttttggcaacgcttgccccggatgcactc
tggaagaccctcaaggtgaactttgaggccggtggcgaaacctacaccgtgaccggaggg
ctcctgctcgaaccgggctggcatgcggtgtacccgttctccgaagcaaaggagacgatc
ctcccggcatttgttaccggagagaaactaccgatacgaaaagtcaaccttgaggaaaag
gagacccttccccctgcccggtacacgcagagcaagctcatccagaggatggaagagctt
ggccttggcaccaagagtacgcgccatgaggtgatagcacggcttgtctcccgcaaatat
atcgaaggtaatccccttcgtccgacccttgtgggccgggtagtgaccgaggcgctggag
cagaacgccgatacgatcaccaaacccgagatgacccagacaatcgaatcgcacatgcag
cagataaaggagagcaagcggacccgcgacgatgtgattgcggaatcgcgcagcatgctg
cataaggcatttgaccagctcgaggcaaacgagcaggtgataggaaacgatatccgggac
cgcaccgcagaggaactcaacctgggccgctgcccggcctgcggcgggacgcttgcgatc
aagcacatgcggggatcgacccagttcattggctgttcgcggtaccctgagtgtacattc
aatatcggtctcccggtcacccagtggggctgggcagtccgcaccgacgatatctgcgac
aagcaccacctccacttcgtgcgccttgtcaggaagggcgcccgtccctgggatatcggc
tgcccgctctgccaccatatcagctccaatgcagagtccctcaccgagatcccctccatg
gatgaggcccttctcgaaaaggcgcgatcaaagcatatctacacagtcgcggagatcgca
cggagcgagccggatgcccttgcaaagtcccttgacctgcccttagagaaagcagggaaa
ctaaaaagtgaagccgggattgtccttgaaaagctgcggcggcgctccgagtgccgcaag
tttttgcgcaaccacctgatcccgcgcaaggggcgcagctatgcaaagatcatggaagcc
ctcggtcagtccggggtaacagatctcgcaagccttgcccatgcaaccccggcaacactc
cagcaggccggtattggcgaaaccgaggcccgtgaccttcttactgaggcccggctcacc
cataacagccagctcttaaaagggaccggtatcccggccgtgagcctgaaaaagtacctg
gaagccggcgtttccggtcctgaagattttgtctccaccggggcagagaaacttgcgacc
ttaaccgggatgagcaccggcacgataaaccggcacctggcccttgtctgcgagtacctg
caccgccccgtgccgttagccgttcccaaggcaaaacttgcgaaagggagaaaggaactg
ctctcggttaagggccttgccgcaaccacggcagacaagcttatcggggcaggggtcata
agtggggatctcctgcttgcagcggataccaaaaaacttgcagcctcaaccgggattgat
gaggaaaagctccggggttaccaggcactgatgaagaaaaaaaaggaaaacgcgatcata
cggatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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