KEGG   Methanoregula boonei: Mboo_1279
Entry
Mboo_1279         CDS       T00578                                 
Name
(GenBank) Transcription factor TFIIE, alpha subunit
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mbn  Methanoregula boonei
Pathway
mbn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mbn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Mboo_1279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbn03021]
    Mboo_1279
Transcription machinery [BR:mbn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Mboo_1279
 Prokaryotic type
  Archaeal type
    TFE
     Mboo_1279
SSDB
Motif
Pfam: TFIIE_alpha TF_Zn_Ribbon DNA_ligase_ZBD HTH_IclR HTH_9 Zn-ribbon_8 HypA DZR_2 Rad50_zn_hook Zn_Tnp_IS91 zinc-ribbons_6 zf-RING_4 zinc_ribbon_4 DUF5351 zf-ribbon_3 Zn_ribbon_SprT Stu2_CTS zf_UBZ HVO_2753_ZBP
Other DBs
NCBI-ProteinID: ABS55797
UniProt: A7I7T6
Position
1300934..1301455
AA seq 173 aa
MDPVEEVLNNPATRAYIHRLIGDEGINLLERFPKDGEHSDEDLAASTGINLNSVRHTLYT
LYEKRLAEYHRIKNNETGWLTYLWQLRIDLLYDAIREDMETVLSKLERRARFEEENDFYI
CKDCHDIYTFTVAMGGNFTCPNCGQPLSHFENETLAKALRARIEIMKKTLGHA
NT seq 522 nt   +upstreamnt  +downstreamnt
atggatcctgtggaagaagtgcttaataacccggctacccgggcatatattcaccggctg
atcggagatgaggggatcaatctcctggagcggttccccaaggatggtgagcacagcgat
gaggatcttgctgcaagcacgggcatcaacctcaactccgtgcgccacacgctttatacc
ctgtacgagaaacggcttgccgagtaccacaggatcaagaacaacgaaaccggctggctg
acctatctctggcagctcaggattgacctgctctacgatgccatccgcgaggatatggag
acggttctttcaaaacttgaacgccgggcgcggttcgaggaagagaacgacttttatatc
tgcaaggactgccacgatatctacaccttcaccgtagccatggggggtaacttcacctgc
ccgaactgcggacagccactttcgcatttcgagaacgagacactggcaaaagcgctccgg
gcgcgcatcgagatcatgaaaaagacgctcggccatgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (19)   
   Pfam (19)   
All databases (33)   

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