KEGG   Mycoplasmopsis bovirhinis: CO229_00260
Entry
CO229_00260       CDS       T06002                                 
Name
(GenBank) DNA polymerase
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
mboh  Mycoplasmopsis bovirhinis
Pathway
mboh03030  DNA replication
mboh03430  Mismatch repair
mboh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mboh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CO229_00260
   03430 Mismatch repair
    CO229_00260
   03440 Homologous recombination
    CO229_00260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mboh03032]
    CO229_00260
   03400 DNA repair and recombination proteins [BR:mboh03400]
    CO229_00260
Enzymes [BR:mboh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CO229_00260
DNA replication proteins [BR:mboh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CO229_00260
DNA repair and recombination proteins [BR:mboh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CO229_00260
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_22 AAA_5 AAA_2 AAA_24 Mg_chelatase AAA_19 AAA_14 AAA_30 AAA_18 DNA_pol3_gamma3 RNA_helicase PIF1 ABC_tran AAA_assoc_2 AAA_16
Other DBs
NCBI-ProteinID: ATO30571
UniProt: A0A2D1JKZ0
Position
complement(51895..53748)
AA seq 617 aa
MDNYKTLYRKYRPKTFEQVVGQEYVVQSLKNLLITGKVGHAYLFCGPKGTGKTSLAKIFA
SVLNCIHSGNPAKACDVCLVNNDKSLDIIEMDAASNNGVDEIRLLKDKIEQAPINSKYKI
YIIDEVHMLTKFAFNALLKTLEEPPHHSIFILATTDPQKIPLTILSRVQRYNFKRMTDSN
IITHLKEVLGNEKITYEENSLKMIALLATGGMRDALSIADQASSFNDNHISQKSLESNFG
LASIDNYIKLLNTIINLDLNMLISLLNEFNNNGSDANHLIRALMNISKEWLLYYKTKEES
FLNWTTKSQILRINLNSKNAVVLYDHFYKILFNIQQHENPYELLQIELISLVDKFSHQVP
FGENIKETSSVVKNLETSKQQSITSVPTQKPKQDQIAEPPKPQFNDFFASVSEDSFLNDR
FIPASTNKLSKQETTNSNLPIESQQLINEFFYLNNQSNQKSIDTSSLLVYDEKIYDDIIS
VCVYSSHEKQFKNIDYTQKYNKLKQDAEIISSTINKQYYEEKTLLKNAKIWIATEHAIVM
VVQDEVNYLDKLRSKSKDSNMQYYIDDIFESGFKKLYFLTNKEKQELIAKVKALKAANKL
NDYIKEPQPEIYFTPKN
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggataattacaaaacactatatcgtaaatatcgtccaaaaacatttgaacaagtagtt
ggacaagaatacgttgttcaaagtttgaagaatttattgataactggtaaagtcggtcat
gcttatttattttgtggacctaagggaacaggtaaaacttcgctggctaaaatttttgct
tcagttttaaactgcattcatagtggtaatccagccaaagcttgtgatgtatgtctagtt
aataatgataaaagtttagatatcattgaaatggatgcagcttcaaataatggagttgat
gaaattaggttattaaaagataaaattgaacaagcgccaattaattcaaaatataaaatc
tatattattgatgaggtgcatatgttaactaaatttgcttttaatgctttattaaagact
ctcgaagagccaccacatcacagcatctttattttagctactactgacccacaaaaaata
cccttaacaattctttcaagggtccaaagatataatttcaagagaatgactgattcaaac
attataactcatctgaaagaagtcttgggcaacgaaaaaataacttatgaagagaactct
ttaaaaatgattgctttattagctactggtggtatgagagatgctttatcaatagctgac
caagctagttcatttaatgataatcatattagccaaaaatcactagaatctaattttggg
ttagcttcaattgataattatattaagctacttaatacaattattaaccttgatttaaat
atgttaattagtttgcttaatgaatttaacaataatggctcagatgctaatcatttaatt
agagcattaatgaacattagtaaagaatgattattatattacaaaacaaaagaagaaagt
tttttaaattgaactacaaagtcacaaattttaagaattaatttaaattcaaaaaatgct
gtagttttatatgatcatttttataaaattttatttaatatacaacaacatgaaaacccc
tatgaattattgcaaatagaattaatttcattagttgataaatttagtcaccaagtacca
tttggtgaaaatataaaagaaactagctctgttgttaaaaatcttgaaacttcaaaacaa
caaagtatcacttcagttccaacgcaaaaacctaaacaagatcaaatagcagagcctcca
aaaccacaatttaatgatttttttgcttccgtaagtgaagatagttttcttaatgataga
tttattcctgcgagtactaataagctatctaagcaagaaactacaaattcaaatctgcca
attgagtcacagcaacttatcaatgaatttttttatttaaataatcagtcaaatcaaaaa
agtattgatacatcatctttattagtatatgatgaaaaaatctatgatgatattattagt
gtttgtgtttattcttcacatgaaaaacaatttaaaaacattgattatactcaaaagtat
aacaaacttaagcaagatgcagagataatttctagtactataaataaacagtactatgaa
gaaaaaacacttttaaaaaatgctaaaatatgaatcgcaactgaacatgcaattgtaatg
gttgttcaagatgaagtaaattatttggacaaacttcgctcaaaaagcaaagatagtaat
atgcagtattatattgatgatatttttgaaagtggttttaaaaaactttatttcttgact
aacaaagaaaagcaagaacttattgctaaagttaaagcattgaaagctgctaataaactt
aatgattacattaaagaacctcagccagaaatttactttacacctaaaaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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