KEGG   Mycoplasmopsis bovis CQ-W70: K668_03275
Entry
K668_03275        CDS       T03268                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mbq  Mycoplasmopsis bovis CQ-W70
Pathway
mbq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mbq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    K668_03275 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbq03021]
    K668_03275 (rpoB)
   03400 DNA repair and recombination proteins [BR:mbq03400]
    K668_03275 (rpoB)
Enzymes [BR:mbq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     K668_03275 (rpoB)
Transcription machinery [BR:mbq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     K668_03275 (rpoB)
DNA repair and recombination proteins [BR:mbq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      K668_03275 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF5887
Other DBs
NCBI-ProteinID: AIA34225
UniProt: A0A059Y4F4
Position
complement(787482..791117)
AA seq 1211 aa
MSTLTHDKYQNKYPYKVRKFGPMTERRDYSATKVTWEVPDFLNMSKESFEWFKKSGIEEI
LREHYPIVSSNKKVSLEYILNSARLEVPPKEYDAIIEAKAKGINYAAKLFAKFKVTSDKG
VVKDDEVLLGEIPLMNSGGSFIINGSEKVIVSQLIRSPSAYFGCGVRNKQSDDLFNKLEI
LPRLGSWVEISHKVTTKNPDSVKIKIDKNKNINLAVFLGALGLNEQNIHDLFGNSPELEE
TLLRDKSLKSSEDPMTVIQNCREILFRTIRRGDLMTETSAANLLPSLLFNKKRYSLGATG
RYKLNKKLSLIDRITETYLGQDLEIKDENGEQLFLEKGTFIEHKLALLIQNNFNNGTLKT
TEIEGINPEILYAKLYTDPAYPYLKKSNKVTKLLVFANRKKMDKGLSTLVIGNDPKCDAQ
HLIASDIIAAINYYFNLLEGIGQDDDADSMINKRIVSVGELMQNQLNVGLSKLEKTTRER
MSAKEPEKITPKNITNNKLVSNQMKTFFNSSKLSQFMDQINALAEISNERRITSLGPGGL
NRDTAQFEVRDVHATHYGRICPIETPEGPNIGLILNLATYASVNEYGFLQTPYFKVENSV
VDYDNVVYLTAADEFGYNIAQSTATVDDNNRLIDETLTIRKNYTYILGKPSDVDLIEVSS
RQMVSVAAGCIPFLENDDANRALMGSNMQRQAVPLLETEAAFVATGNEADIAKFSAANFR
ARQEGKVEYVDGAKIKIRNNKGTLDTYNLKNFQRSNQDTVIHQKPIIKVGQEVAKGDLLV
DGSSFKDGELALGKNLLVAFSTYKGYNYEDAIVLNERLAKKDVLTSIHIEEQTIQFRTSK
AGADELTRDIPNVSKYAIRHLDEHGIVLVGSEVIPGDVLVGRVSPKGDDNPSREEKLLAA
ILGQRQLNVKDTSLKVKNGHNGTVIGVEILSRENKDLLEDGIDMIVKVSIAVKRKIRVGD
KMSGRHGNKGVVSVILPEEDMPHLEDGTPIDVMLNPQGVPSRMNIGQVLEVHLGMAARSL
GCKFVTPVFDGVKKEAIQDVISEAGLPLSGKQTLIDPITGEKFDNPVSVGVMYMFKLNHM
VDDKMHARSVGPYSLITQQPLGGKSQNGGQRFGEMETWAIESYGAANVLQEILTYKSDDI
VGRNQLYTSLVTGKDLPTPGIPESFNVLNYELNGLGMKLDITTANNEEDDEEAQQYFDIS
NSVGNEGDYNE
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgtcaacattaacacatgataaatatcaaaataaatacccatacaaagttagaaaattt
ggtccaatgactgagcgtcgtgactattcagcaacaaaagttacttgagaagttcctgac
tttttaaatatgtcaaaagagtcatttgaatgattcaaaaagagtggaattgaagaaatt
ttaagggaacattacccaattgtttctagcaacaaaaaagtttctttagaatacattctt
aattctgcaagattagaagtgccacctaaggaatatgatgcaattatcgaagcaaaagcg
aaaggtattaactatgcagctaagctttttgctaagtttaaggtaacatctgacaaaggt
gttgttaaagatgacgaagttttacttggcgaaattccacttatgaactctggtggaagt
tttattattaatggaagcgaaaaagttatagttagtcagttaattcgttcgcctagtgca
tactttggttgtggtgtgcgtaacaagcaatctgatgacttgtttaacaagttagaaatt
ttgcctagattaggttcatgagttgaaatttcacacaaagttacaactaaaaatcctgat
tcagtaaaaattaagattgataaaaacaagaacataaatcttgcagtatttttgggtgct
ttaggtcttaatgaacaaaacattcatgatctttttggtaattctcctgaattagaagaa
acactacttagagataaaagtcttaaatctagcgaagatcctatgacagttatccaaaac
tgtagagaaatcttgtttagaactatccgtagaggcgatctgatgactgaaacatcagca
gctaatcttttgccatcgcttttatttaacaaaaaacgttatagtcttggcgccactggt
agatacaaacttaacaaaaagctaagtttaatagaccgtatcactgagacatatttaggt
caagacttagaaattaaagatgaaaacggcgagcaattattcttagaaaagggaactttt
attgaacataagttagctttacttattcaaaacaacttcaataatggaacattaaaaaca
acagaaattgaaggcattaatcctgaaattctttatgcaaaactttatacagatccagct
tatccatatttaaagaagtcaaataaagtcacaaaacttttagtttttgctaatagaaag
aaaatggacaaaggtctttcaacactagttattggaaatgatcctaaatgcgatgcacaa
cacttaattgcatcagatattattgctgcaattaattactatttcaatctattagaagga
attggacaagatgatgatgccgattctatgattaataaaagaatagtttcagttggcgaa
ttgatgcaaaatcaattgaatgttggactttcaaaattggaaaaaaccactagagaaaga
atgtcagctaaagagcctgaaaagattactcctaaaaatattacaaataacaaactggtt
tcaaaccaaatgaaaacattcttcaatagctcaaaattgtctcaatttatggatcaaatt
aatgctttggctgaaatttcaaacgaaagacgtattacttctttaggccctggtggtctt
aatcgtgatactgcacaattcgaagttcgtgacgtgcacgctactcattatggaagaatt
tgtcctattgaaactcctgaagggccaaacattggtcttattcttaaccttgcaacttat
gctagtgttaatgaatatggttttttacaaactccatattttaaagttgaaaactcagta
gttgactatgacaatgtagtttatttaacagctgctgacgaatttggatacaacattgct
caatcaacagcaactgttgatgataataatagattaatagatgaaacactcacaattaga
aaaaattacacatatattttaggtaaacctagtgatgttgatttaattgaagtttcatca
agacaaatggtttcagttgctgctggatgtattccatttttagaaaatgatgatgctaac
cgtgcacttatgggttcgaacatgcaacgtcaagcagttccacttttagaaactgaagca
gcttttgtagctactggtaatgaggcagatattgctaaattttcagccgctaacttcaga
gcaagacaagagggaaaagttgaatatgttgatggcgccaaaattaaaattaggaataat
aaaggcacattagatacatataatttaaaaaacttccaacgttcaaatcaagatacagtt
attcaccaaaaacctattattaaagttggtcaagaagttgctaaaggcgatttattagtt
gatgggtcaagcttcaaggatggggaacttgctttaggtaagaaccttctagttgctttt
tcaacatataaaggctataactatgaagatgctattgttttaaacgaaagattagctaaa
aaagatgttcttacatcaattcatattgaagaacaaactattcaatttagaactagcaaa
gccggtgctgatgaattaactagagacattccaaacgtatctaagtatgctattagacac
ttagatgaacatggtattgttttagttggttctgaagttattccaggagatgttttagtt
ggacgtgtttcacctaaaggcgatgataacccatctagagaagaaaagttacttgctgca
attttgggccaaagacaactaaatgttaaagatacttcacttaaagttaaaaatggccac
aatggaacagttattggtgtcgaaattctaagtagagaaaacaaagacttacttgaagat
ggcattgatatgattgtcaaggtttctatcgctgtaaaacgtaaaattcgtgtaggtgac
aagatgtctggacgtcacggtaacaaaggtgttgtttcagttattcttcctgaagaagat
atgccacacttagaagatggaacaccaattgatgttatgcttaatcctcaaggtgtgcct
tcacgtatgaacattggtcaagtcttagaagttcatttaggtatggccgctagaagttta
ggatgcaaatttgttactcctgtgtttgatggtgttaaaaaagaagctatacaagatgtt
atttcagaagctggcttgcctttatcaggaaaacaaacattaatagaccctattactggg
gaaaaatttgacaatcctgtgtcagttggtgttatgtatatgttcaaacttaaccacatg
gttgatgacaaaatgcatgcacgtagtgttggcccatattcacttattactcaacaacca
cttggtggaaagagccaaaatggtggtcaaagatttggtgaaatggaaacctgagctatt
gaatcatatggtgcagctaatgtgttgcaagaaattcttacatacaagtctgatgacatt
gtaggacgtaaccaactatatacatcactagttactggcaaggatttaccaactccagga
attcctgaatcatttaacgtattaaactatgaattaaatggattgggaatgaaattagat
attacgactgcaaataacgaagaagatgatgaagaagcccaacagtactttgacataagc
aattcagttggtaatgagggagactataatgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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