KEGG   Monosiga brevicollis: MONBRDRAFT_33205
Entry
MONBRDRAFT_33205  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
mbr  Monosiga brevicollis
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mbr03016]
    MONBRDRAFT_33205
Enzymes [BR:mbr01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     MONBRDRAFT_33205
Transfer RNA biogenesis [BR:mbr03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    MONBRDRAFT_33205
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 5892821
NCBI-ProteinID: XP_001747479
JGI: 33205
UniProt: A9V454
AA seq 403 aa
MADGLMGTGTSATAGVVAPPALRRIWRGEEAVQQVVRGYLTRGNVLVWEPAEEKYLRAQW
HLVPQPLGTLVNHVMQNGFHGPPYQLEPEAVTLLLAHGAIELYDGEAYQPPEPELIQHVR
EQRLDSVMLQMEHYCSTSELSTADPASEASLKPIASNEPGSDDATLVVADNETPTTTLDG
EGSDDQDESIADMSVKDQAEPVPKRAKRAKRSKRADPDLPRTILPWRLNRADILRWLKMI
EAMREQVKLPDLSRQELATSDPNTTWSSLKRSALKAVDSVRFMIPRLPTASRLESLPRAA
LAFPTTAQQRRREMVYHDLVQRGYYLTSGIKFGGDYLVYPGDPYRYHSHFVARVVPHTAS
ISPMDVLALGRLGTVVKKAPVLCSVDVDRGTISYMSIEWTGAN
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcagatggtttgatggggaccggaacgagtgccacggcgggcgtggtggcgcccccg
gctctgcgcaggatatggcgtggggaagaggcagtgcagcaggtggtgcgtgggtatttg
actcggggcaacgttcttgtctgggagcctgcagaggagaagtatctacgcgcacaatgg
caccttgttccgcaacccctcggcacgctcgtcaatcacgtaatgcagaatgggttccat
gggcctccctatcaactcgagcctgaggccgtgaccttgctgctagcccatggtgccatt
gagctgtatgacggcgaagcttaccagccgcccgagccggaattgattcagcacgtgcga
gaacagcgcttggacagcgtgatgcttcagatggagcactactgtagtaccagcgagctc
tcgacggctgatccggcatccgaagcttcactcaagcccatcgcaagcaacgaaccgggc
agcgatgatgccacacttgttgttgccgataatgagaccccaaccacaactctcgacggg
gagggatcggacgatcaggatgaatcgatcgccgacatgtctgtcaaagaccaggctgag
cctgtgccgaagcgcgccaaacgcgccaagcgctccaagcgtgctgatcctgacttacca
cgcaccattctaccgtggcgtctgaaccgtgctgacattctacgctggctcaagatgatt
gaggctatgcgcgagcaagttaagctgccggatttatcacgacaggagctggccacctct
gaccccaataccacatggagcagtctcaagcgcagcgcactcaaggcagtggattcggtg
cgctttatgattcctcgcttgcccacggcatcgcggctggaatccctcccccgtgctgct
ttggcgtttccaaccactgcccaacaacgccgccgggagatggtttatcacgatctcgtg
cagcgtggctactatctgacttcgggcatcaaatttggaggcgactatcttgtgtaccca
ggtgatccctatcgctaccattcgcactttgtggcgcgcgtggtgccgcacaccgcatcc
atttcacccatggatgtattggcccttggtcggctgggcacagtggtgaaaaaggccccc
gttttatgttcggttgatgtggatcgcggcacgataagctacatgtccatcgagtggaca
ggtgcaaattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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