KEGG   Marinobacter sp. BSs20148: MRBBS_2387
Entry
MRBBS_2387        CDS       T02323                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
Organism
mbs  Marinobacter sp. BSs20148
Pathway
mbs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MRBBS_2387 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbs03019]
    MRBBS_2387 (rhlB)
Messenger RNA biogenesis [BR:mbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MRBBS_2387 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 UTP25 PAC_bac CBFD_NFYB_HMF
Other DBs
NCBI-ProteinID: AFP31323
UniProt: M1FKF3
Position
complement(2519638..2521029)
AA seq 463 aa
MTIDNNPTDSNPTSAADNNISSASDSPVIDSPTVDRSHTSDLRFSDLNLDHRLQQAIAAI
GFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAAFLITAIQTMLETPIEDSKRFASEPR
VLALAPTRELAMQIAKDAEQLCAHTGHKVVTVVGGMHYDKQRDQLQNEVVDILVATPGRL
IDFLGSQDVFLDQIDILILDEADRMLDMGFIPDVKRIIRKCTPKEDRQTLLFSATFNQDV
LNLASMWTQSAEFVEIEPEQKTAERVEQTVYLVGDDEKLRVLVNYLKRPEVDKALVFANR
RDQCRDLEEDLRNQGVSVSLMSGEIAQAKRLKTLEQFKAGSIQVLVATDVAGRGIHVNGV
THVFNYNLPDNAEDYVHRIGRTGRAGSTGVSISFAGEDDSFALPAIEKYIGQKLANEVPD
EALMVPMDNAPIARKRGRRPQGTRPTGNRSSGNRSGNSRPRRS
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaccattgataataatcctaccgacagcaacccgacgtctgctgctgacaacaacatc
tccagtgctagtgacagtcccgttattgacagtcctactgttgatcgcagtcatacctct
gatttgcgttttagcgacttgaatctggatcatcgcctgcagcaggccattgccgccata
ggctttgagtactgcactccgatacaggctgaaaccctgccttggaccctggcctgccag
gacctgatcggccaggctcagaccggcaccggcaaaaccgccgcgtttctgattaccgcg
atccagaccatgctggaaaccccgattgaagacagcaagcgttttgcctcggagccgcgg
gttctggcgctggcgcccacccgtgaattggcgatgcaaatcgccaaagacgccgagcag
ttgtgtgcccataccggccataaagtcgtgaccgtggtgggtggtatgcactacgacaag
cagcgtgatcagttacagaacgaagtcgtggatattctggtggcaacgccgggccggcta
atcgattttctggggtctcaggacgtgtttcttgaccaaatcgatattctgattcttgac
gaagccgaccgcatgctcgatatgggctttattccggatgttaagcgcatcattcgcaag
tgtacgccaaaggaagatcgtcaaacgctgctgttcagcgcgacgtttaaccaagatgta
ctgaatcttgcctctatgtggacccaaagcgccgagtttgtggaaattgagccggaacag
aaaaccgccgagcgggttgaacagaccgtatacttggtcggcgatgatgaaaaactgagg
gtgctggtgaattatctgaagcgcccggaagtggacaaggcgctggtgttcgccaatcgc
cgtgaccagtgccgtgatttagaagaagacctgcgcaatcagggggtctctgtttcgctg
atgtctggcgagattgcccaagccaaacgcctgaaaacccttgagcagttcaaggccggc
agcattcaggtgctggtggctacagacgtcgcaggccgtggtatccacgttaatggcgta
acccatgtgttcaactataatctgccagacaacgccgaagattacgtacaccgtatcggc
cgcaccggtcgtgccggcagcaccggcgtgtctatcagctttgccggcgaagacgactct
ttcgccctgccggcgattgaaaagtacatcggccagaagcttgctaacgaggttccagac
gaagcgttgatggtgccgatggacaacgctccgatcgcccgtaaacgcggtcgtcggcca
cagggcacgcgcccgaccggtaaccgtagcagtggcaaccgcagtggcaatagccggccg
cgcagaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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