KEGG   Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_3028
Entry
JTY_3028          CDS       T00864                                 
Symbol
gatA
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit A
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
mbt  Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt00970  Aminoacyl-tRNA biosynthesis
mbt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mbt00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    JTY_3028 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:mbt03029]
    JTY_3028 (gatA)
Enzymes [BR:mbt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     JTY_3028 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     JTY_3028 (gatA)
Mitochondrial biogenesis [BR:mbt03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    JTY_3028 (gatA)
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: BAH27306
UniProt: C1AGC7
Position
complement(3317087..3318571)
AA seq 494 aa
MTDIIRSDAATLAAKIAIKEVSSTEITRACLDQIEATDETYHAFLHVAADEALAAAAAVD
KQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPI
LGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGS
IRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDS
TSVDAEVPDVVGAARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAE
VSEVDCPHFDHALAAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGF
GPEVKRRIMIGTYALSAGYYDAYYNQAQKVRTLIARDLDAAYRSVDVLVSPTTPTTAFRL
GEKVDDPLAMYLFDLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVG
AAYEAARGPLLSAI
NT seq 1485 nt   +upstreamnt  +downstreamnt
gtgacggacatcatccgatccgacgccgcgacgttggccgccaagatcgccatcaaggag
gtgtcgtcgaccgagatcacccgggcctgcctggatcagatcgaggcgaccgacgagacg
taccacgccttcctgcatgtggcggccgatgaggcgctggcggcggcggccgccgtcgac
aagcaggtggccgctggagaacccttgccgtcggcgctggccggggtgccgctggcgctc
aaggacgtcttcaccaccagcgacatgcccaccacctgcgggtcaaaaatcctggaggga
tggcgatctccctacgacgccacgctgaccgcgcggttgcgcgccgcggggatcccgatc
ctgggcaagaccaacatggacgagttcgcgatgggctcgtcgacggagaactccgcttac
ggtcccacccgcaacccgtggaatctcgaccgggtacccggcggttccggtggcggcagc
gcggcggcgctggccgcgttccaggcgccgctggccatcggatccgacaccggggggtcg
atccgccagccggccgcgctgaccgcgaccgtcggcgtcaaacccacctacggcacggtg
tcgcgctatgggctggtggcctgcgcgtcctcgctggatcagggcggcccgtgtgcgcgc
accgtcttggacaccgcgctgttgcatcaggtgatcgccggccacgacccgcgcgactcc
acgtcggtcgacgccgaggtgcccgacgtggtgggcgccgctagggccggcgcggtcggg
gatctgcgtggcgtgcgggtcggcgtggttcgacagctgcacggcggcgagggctaccag
ccgggcgtgctggcctccttcgaggctgccgtggagcagctaaccgcgctgggcgctgag
gtcagcgaggtcgactgcccgcacttcgaccatgccctggccgcctattacctgattctg
ccctcggaggtgtcgagcaatctggcgcgcttcgacgcgatgcgctacgggctgcgggtc
ggcgacgacggcacccgcagcgccgaggaggtgatggcgatgacccgggccgccggtttc
gggcccgaggtcaagcggcgcatcatgatcggcacctacgcgttgtcggccggctactac
gacgcctattacaaccaggcgcagaaggtgcgcacgctgatcgcccgcgacctcgacgcg
gcgtatcggtccgtcgacgtgctggtgtcgcccacgaccccgaccaccgcgttccggctg
ggtgagaaggtggacgatccgctggcgatgtacttgttcgacctgtgcacgctgccgctg
aacttggccggccactgcggcatgtctgtgccgtcggggctctccccggacgacgggttg
ccggttggcctacagatcatggcgccggcattggccgacgaccggctctaccgggtgggg
gcggcttatgaggccgcccgcggcccgctactgagcgccatttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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