KEGG   Methanosarcina barkeri Wiesmoor: MSBRW_0638
Entry
MSBRW_0638        CDS       T03839                                 
Name
(GenBank) Exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mbw  Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:mbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbw03400]
    MSBRW_0638
DNA repair and recombination proteins [BR:mbw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MSBRW_0638
    Archaeal homologous recombinant proteins
     MSBRW_0638
SSDB
Motif
Pfam: SMC_N AAA_21 AAA_15 AAA_29 ABC_tran AAA_16
Other DBs
NCBI-ProteinID: AKB49891
UniProt: A0A0E3LKP7
Position
complement(767849..771073)
AA seq 1074 aa
MKLKNLHIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DVIFKGAENAKINLGFEHLGQDYLIEQAFRYSSKSENASNSKCVLYANGESIVDQATRTY
EEVCSLLNMDEEAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVRRLQRDTSNSLSGVKAEIEGIESTEPHAVLNGLRQKIKESDTILKKCNENKEAAAAQ
KEKLDLMITEHRERLQEIQTLKQALSKSQEDKAGCIREKEAFAREAHEQRQALLGLEEEN
NHIRGECGFGDLEIEALSLQKEKEEFLAREKVNVISKELALLLREEEVHTQDLRDFENEK
AETEQSLMQCRADIGATNGEIEGNRKNILRIEDENKKLKEAAKETTGFTDTYEIPLFINE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNTKVAVRKSKTEIEILEEE
LRENEKAVLEVKEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATL
RELDKVIRKNRQLLAEGKCPTCGQDLKGSEIACTTGESEQKREKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRISDYDLETERLKNKAKDLQERITIHKTRTEEDSLKLEGLNKQKEE
LEAKMGKLLPDIKALQGWEAAAQKAHGESERVLQEAKAFEKKLAENTSEIESLNGKIRTS
LALIENYGQRLGELNEKLKGLAERETQEKEKLKTLEVELEALRKKEALAKETHDESSKHL
LKTKKLGANLIQMDNIKHKISELEASIRNLAEKVGFFDREILERNERVKQLEGKLQGSRF
EDLQSKRTQLEEYQANLTEKTRQTTAAKDALLKEVGMVENSLKRRNELKDELKALENRKQ
YLEAVYSNAEELESMYMRVRADMRNRNIGALSTLLNEMFSFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLALGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIVKL
NT seq 3225 nt   +upstreamnt  +downstreamnt
gtgaagctcaaaaacctgcatattgaaaacatccggagctataaaaaactggattttaca
tttgaagacggagttacagtcatttccggggtgaacgggagcgggaaatcaagcctgctt
gaagcatgttttatgggacttttcgggagcaaaattctttcaaaggactttgtgcttgca
gatgtaatcttcaagggggccgaaaacgcaaaaataaacctgggttttgagcatttaggg
caggattaccttatagaacaggctttcaggtattcttctaaaagtgaaaacgcttcgaat
tcgaaatgcgtgctctatgccaatggggaaagtattgttgatcaggctacacggacttac
gaagaggtctgctctcttctgaacatggacgaagaggcgtacagaaactgtgcttacatc
aggcagggcgaaattgacgtactcattaatgcaaaaccaaaagacaggcagcggatgatc
gacggcttgctgcagcttggaaagctcgaagaatacagggaaagagcaggaagcgcaaaa
acggctgtaagaaggcttcaaagggacaccagtaacagcctttcgggtgtaaaagccgaa
attgaggggatcgaaagtacagaaccgcatgccgttttgaatgggctcaggcagaagata
aaggaaagcgatactatcttaaaaaaatgtaatgaaaataaagaggctgcagctgcccag
aaagaaaaactcgaccttatgattacagaacacagggaacgtctccaggaaatccagact
ctgaaacaggccctgtctaaatctcaggaagacaaggcaggctgtatccgggaaaaagaa
gcctttgccagagaagcccatgaacaaaggcaggctctgcttggactagaggaagagaat
aatcatattcggggagaatgcggctttggagaccttgagattgaggctttgagcttgcag
aaggaaaaagaggagtttcttgccagggaaaaggtaaatgtaatctcaaaagaacttgct
cttcttctcagggaagaagaagttcacactcaggatctgcgcgactttgaaaacgaaaag
gctgagaccgaacagagtttgatgcagtgcagggcggatatcggggctacaaacggggaa
attgaaggaaacagaaaaaatatactgagaattgaggatgagaataaaaagctaaaagaa
gctgcaaaagagaccacaggcttcacggacacttatgaaattcctttgtttataaatgag
ctggaagaaaaagaaagccttcttcgtgaacggaaaaacgaagcctcaacaaaacttgca
cttgctttcaaagaaaaagaaaccggagacataaatctcctcacacttgataaggaactt
caaaataccaaagtcgcagttcgaaaaagtaaaaccgaaattgaaattcttgaagaggag
ctcagggaaaatgaaaaggcagttctggaagttaaggagcaaaaatccgaagcttctgca
gggttaaaaggacttggctttaccggagagcagctcgaggacctggaatacctcagcgaa
cttctgctggaaaacaaaaacaggctgcatgggcgagaaaaagagcttgaagctaccctc
agggagcttgataaagttatccgtaaaaaccggcagctacttgccgaaggaaaatgccct
acatgcgggcaggatcttaaaggctctgaaattgcatgcacaaccggggaatccgaacag
aagagagaaaaacttgcagcagaacttctcgatataaagctccagcaagccgaagtcgag
aaaaaacttaatcgactcaaggacgcaaaaaaactggagaagcggatttcggattacgac
ctggaaaccgaaagactcaaaaataaggcaaaagacctgcaagaaaggataacgatccac
aaaacccgaaccgaggaagattcccttaaacttgaaggccttaataaacaaaaggaagaa
cttgaggctaagatgggcaagcttcttcctgatattaaagccctgcagggatgggaagcg
gcagctcaaaaagctcatggtgagagtgaaagagtacttcaagaggcaaaagcctttgag
aaaaagcttgccgaaaacacctcggaaatagaaagcctgaacgggaaaatcaggacttcc
ctggcactgatcgaaaattacgggcagaggcttggagagctcaatgagaaactaaaaggg
cttgccgaacgagagactcaggaaaaggaaaaactcaaaaccctggaagttgagcttgaa
gccctgaggaaaaaagaagccctggcaaaagaaacccatgacgagagttcaaagcatctc
ttgaagacaaaaaaactcggggcaaacctgatccagatggataatataaagcacaaaatc
tccgagcttgaggcttcaatcaggaaccttgccgaaaaagtcggcttttttgaccgggaa
atccttgaaagaaacgagcgggtaaaacagcttgaaggaaaacttcagggaagcagattc
gaagatcttcagtcaaagcgtacccagcttgaagagtatcaggcaaaccttactgaaaaa
acccggcaaaccacggccgccaaagatgctctcttaaaagaagttggtatggttgagaat
agtttaaaacgccgcaatgagctgaaggatgaactcaaagcccttgagaacaggaagcag
taccttgaagccgtatatagcaatgccgaggagcttgagagcatgtatatgcgcgttcgg
gcggatatgcggaatagaaacataggggctctttctacccttttgaatgaaatgttcagc
ttcatgtacacaaataatgcgtattcccatatcgaactcgacccggaatataaccttacg
gtttacagaaaagacggcactccacttgaaccaaaactccttagcggaggagaacgtgca
atctttaaccttgtcctgcgctgtgcgatctacagacttcttgctctgggttttggcgga
gatagggcagacgggcttccccctatgatccttgacgagcctacagttttcctggaccgc
gggcatataaaccagcttttgaaactcatagacatgatgcgtggcataggcgtaggccag
attattgtggtctcccatgacgagtcccttatagattcggcagaccatgtcttccaggta
gaaaaagaccctattaccaatatgtcgtctattgtaaaactttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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