KEGG   Methanosarcina barkeri MS: MSBRM_1264
Entry
MSBRM_1264        CDS       T03838                                 
Name
(GenBank) RNase L inhibitor
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
mby  Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:mby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mby03009]
    MSBRM_1264
Ribosome biogenesis [BR:mby03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    MSBRM_1264
SSDB
Motif
Pfam: ABC_tran SMC_N RLI AAA_21 Fer4 Rad17 Fer4_6 Fer4_21 AAA_22 AAA_16 RNA_helicase Fer4_9 Fer4_2 Fer4_7 AAA_29 Fer4_10 AAA AAA_23 RsgA_GTPase NACHT VapE-like_dom Fer4_4 AAA_25 AAA_33
Other DBs
NCBI-ProteinID: AKB54262
UniProt: A0A0E3QUI9
Position
complement(1674644..1676410)
AA seq 588 aa
MRIAILNKDKCQPRQCSKECEKYCPRVRTGDETIVFEEDGKPVISEELCVGCGICVHKCP
FKAIMIIGLPETLTEPTHRYGVNGFALFGLPVPRVGKVTGILGPNGIGKSTSVQILSGTL
VPNFGQEKGDWDTVLEHYAGTALYDYFKDVVDGKVRVSQKPQYVDLIPKAFKGKTSELLE
NTDERGVLDELIDYLDLKNIVDRKISELSGGELQRVAIAACAAKDAQFYFFDEISPYLDI
YQRINVARLIQDISKDRTVLVVEHDLALLDMLADVIHIAYGEPAGFGVVTLPKSVRVGIN
QYLKGYLPEENIRIRPEAIKFEVHPPREDYQLRSMVTFNGFSKKFGDGFSLKATGGSLRE
GEVLGIVGPNGIGKSTFVKVLAGEIKPEEGDPGIDVKISYKPQYIKADIPVRVQDFLRGI
SKHFGTSYYEVEISNPLQLDKIYDNMLTDLSGGELQRVAIAACLSQEADLYILDEPSAHL
DVEQRSMVTKVLNRFAENNNKTALVVDHDIYMIDMLSQRLVVFEGKPSVYGEAHGPFSME
DGMNRFLKNLGITFRRDEETRRPRVNNLGSRLDREQKESGNYYYSAGD
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagaatagctatacttaataaagataagtgtcagcccagacagtgtagtaaggagtgc
gagaaatactgtcctagagttcgaacaggggatgagacgattgtttttgaagaagacgga
aagcccgtaatttccgaagaattatgtgtaggttgcggaatttgcgtccacaaatgccct
tttaaagccattatgatcatagggcttcctgaaactctgacggagcctactcataggtac
ggagtaaatggttttgctctcttcggattgcctgtacccagggtaggaaaagtaacaggg
attctcggccctaacgggataggaaaaagtacgtccgtccagatcctttcaggaactttg
gtccctaatttcggacaggaaaaaggcgattgggatactgttcttgaacactatgccgga
actgcactttacgattactttaaagatgtcgtggatggtaaagttcgggtttcccaaaaa
ccccagtacgtggacctcattcctaaagctttcaaaggaaaaacctccgaactgcttgaa
aataccgatgaaagaggagtccttgatgagcttatcgactatctcgatttaaaaaacata
gttgacaggaaaatctcggaattgagtggtggagagctgcagcgtgtagcaatagcagca
tgtgcggcaaaggatgctcagttctacttctttgatgaaattagcccctaccttgatatc
taccagaggattaacgtcgcccgcctgatccaggatatctcaaaggacaggactgtgctc
gtagtagagcatgaccttgcacttctggacatgctcgcagacgtcattcacattgcctac
ggagagcctgcaggtttcggtgtggttactcttccgaagagtgtacgtgtgggaattaac
cagtacctcaaaggctatctccctgaagaaaatataaggatccggcctgaggccatcaag
tttgaagtccatcctccaagagaagactaccagttaaggtctatggttacctttaatggt
ttttcaaagaaatttggagacggcttttccctgaaagccacaggcggcagtcttcgagaa
ggcgaggtgctagggatagtgggccctaacgggataggaaagtcaaccttcgtaaaagta
cttgcaggagaaatcaaacctgaagagggtgatccaggcatagatgtcaagatttcttac
aagcctcagtatattaaagccgacatccctgtgcgcgtacaggacttcctgcgcgggatc
tcaaagcattttggaaccagctactacgaggtagagatttcaaacccactccagcttgat
aagatatatgacaacatgcttacagaccttagtggtggagaactgcaaagagttgcgatt
gcagcctgcctttctcaggaagccgacctctatatcctggacgaaccaagtgcccatctg
gacgtggaacagcgttccatggtcacaaaagtcctcaaccgctttgccgaaaacaacaat
aagacagcccttgtcgtagaccacgatatctacatgatagatatgctaagccagagactc
gttgtttttgaaggcaagccttcagtatacggtgaagcgcatggcccgttcagcatggaa
gacggtatgaacagattcctgaaaaacctgggtataactttccgtagggatgaggaaaca
aggcgtccacgtgtgaataatctgggctcaaggcttgatcgggagcaaaaagagagcgga
aattactattactcagcaggtgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (31)   

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