KEGG   Methylococcus capsulatus: MCA0103
Entry
MCA0103           CDS       T00205                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
mca  Methylococcus capsulatus
Pathway
mca00550  Peptidoglycan biosynthesis
mca01100  Metabolic pathways
mca01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:mca00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    MCA0103 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    MCA0103 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mca01011]
    MCA0103 (mrdA)
Enzymes [BR:mca01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     MCA0103 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:mca01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   MCA0103 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: AAU90710
UniProt: Q60CK3
Position
109218..111053
AA seq 611 aa
MNIRAARRFQNDVRVFQSRIAFSVVLLLLAVAALVVRLVYLQIVGHEHYATLSQDNRVKI
APLPPTRGVIYDRNGEVLADNVPSYSLELVPERIDDLDATLAELQTLLGLSDEDVRRFRK
LRSQHKSFESIPLKMRLDEEQIARFAVKQPFFPGVQIAVRMIRTYPYAELTAHAVGYVSR
ISEADLKTLDPSLYSGTYHIGKSGIEKTYETLLHGRTGHQELETNVQGRSIGVLNTVPPI
PGADLRLSLDITLQRAAVDALGDYNGAVVAMEPATGRVLAFVSKPSFDPNPFVYGIPKAD
YDRLQASPDRPLYNRALRGVYPPGSTVKPFEGLAGLEVGDLAADRKVSCPGYFQLPNSSH
QYRDWRKGGHGAVDLKSAITQSCDVYFYKLALSLGIDKLSEFMGRFGFGTRTGIDIPGEL
PGVYPSKEWKKKRSKYPWFPGETVITGIGQGYVGVTPVQLARATAILANRGRVVTPRLLD
GVQGGAGAAPEERRREELAIAPEHWDTVIQAMIDVVHSPRGTAKSIAGGLAYHVAGKTGT
AQVFSVAQGQKYRESEVSKEMRDHALFIAFAPAEQPRIAVAVIAEHGGHGGSVAAPVARA
VMERYLSGSAP
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgaatatccgagccgcccgcaggttccagaacgacgttcgggtattccagtcccgcatc
gccttcagcgtggtcctgctgctgctggcggtggcggcgctggtggtgcgtctggtttat
ctgcagatcgtcggtcacgagcactacgcgaccctgtcacaggacaaccgcgtcaagatc
gcaccgttgccgccgacacggggcgtcatctacgaccgcaatggcgaggtactggcggac
aacgtgccttcgtacagtctggaactggtgccggaacgcatcgacgacctggacgcaacg
ctggcggaactccagaccctgctcgggctgagcgacgaggacgtgcgccggttccgcaag
cttcgatcccagcacaagagcttcgagagcatccctctcaagatgcggctggatgaagaa
cagatcgcgcgtttcgcggtcaagcagccgttctttcccggcgtccagattgccgtgcgc
atgatccggacctatccttacgccgaactcacggcgcatgcggtaggctacgtcagccgc
atcagtgaggcggatctgaagacgctcgatccttcgctctacagcggcacttaccacatc
ggcaagagcgggatcgaaaagacctacgagacgttgctccacggccggaccggccatcag
gagctggaaaccaatgtgcagggccgctcgatcggcgttctcaacacggtaccgcccatc
ccgggggccgatctgcgcctgtcgttggacatcaccctgcagcgcgcggcggtcgacgcc
ctgggtgactacaacggtgcggtggtggcgatggagcccgcgacgggccgggtgctggcc
ttcgtcagcaagccgagcttcgatcccaatcccttcgtgtacggcattcccaaggcggat
tacgaccggctgcaggcctcgccggaccgtcctctgtacaaccgcgccctgcgcggcgta
tatccgccggggtcgacggtgaagccgttcgaagggctggcgggactcgaagtcggggac
ctcgccgccgaccgcaaggtgtcctgccccggctatttccagttgcccaattcctcccac
cagtaccgcgactggcgcaaaggcggccacggcgccgtcgatttgaaatcggcgatcacc
cagtcctgcgacgtgtatttctacaaattggccctcagtctgggcatcgacaagctgagc
gaattcatggggcggttcggcttcggcacgcgcaccgggatcgacattccgggtgagttg
ccgggcgtctatccctccaaggaatggaagaagaagcgcagcaaatacccctggtttcct
ggagagacggtcatcaccggcatcggccagggctacgtgggggtgacgccggtgcaactg
gcgcgggccaccgccattctggccaaccggggtcgcgtggtcacgccgcggttgctcgat
ggggtgcagggaggggccggcgcggcgccggaagaacgccgccgggaggaactggccatc
gcgccggagcattgggacacggtgatccaggcgatgatcgacgtcgtgcacagtccccgc
gggaccgcgaagagcatcgccggcggccttgcctaccatgttgccggcaagaccgggacg
gcccaggtcttctcggtggcgcaggggcagaaataccgggagtcggaggtgagcaaggag
atgcgggaccatgcgttgttcatcgccttcgccccggcggagcaaccccgcatcgccgtg
gccgtgatagccgagcacggggggcacggcggctcggtcgccgcgccggtcgcccgggcg
gtgatggagcgctatctgagcgggagcgccccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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