KEGG   Methylococcus capsulatus: MCA2573
Entry
MCA2573           CDS       T00205                                 
Symbol
polI
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mca  Methylococcus capsulatus
Pathway
mca03030  DNA replication
mca03410  Base excision repair
mca03420  Nucleotide excision repair
mca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MCA2573 (polI)
   03410 Base excision repair
    MCA2573 (polI)
   03420 Nucleotide excision repair
    MCA2573 (polI)
   03440 Homologous recombination
    MCA2573 (polI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mca03032]
    MCA2573 (polI)
   03400 DNA repair and recombination proteins [BR:mca03400]
    MCA2573 (polI)
Enzymes [BR:mca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MCA2573 (polI)
DNA replication proteins [BR:mca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MCA2573 (polI)
DNA repair and recombination proteins [BR:mca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MCA2573 (polI)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MCA2573 (polI)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2
Other DBs
NCBI-ProteinID: AAU91347
UniProt: Q604H0
Position
complement(2754083..2756803)
AA seq 906 aa
MPVSDTSPLLVLVDGSSFLYRAFFALPPLTNSHGEPTGAVYGVINMLRKLLQTYDGAHIA
VVFDAPGRNFRDELFEHYKAHRPPMPDDLRSQIEPLHQVVRAMGLPMLIEPGVEADDVIG
TLARQAVERGFRVVISTGDKDMAQLVCDRVTLENTMFDSRLDVNGVIVKFGVPPERIVDY
LALVGDTSDNIPGVPKVGPKTAAKWLAEYGSLDALIARAGEIGGKTGENLRASLELIPLS
RELATIRCDLPLPLTPESLERRPPDKAALRELYTRLEFKTLLRQLDAEADDPKAAPPVAA
APEVQTRYQAVMDPAAFDRWLEKLEAAELFAFDTETSSLDYMRAEVIGLSFAVEPGAAAY
VPLAHDYPGAPPQLDRAMVLERLRPLLEDPGKAKLGQHLKYDANVLLNHGIMLRGIRHDT
MLESYVLNSTATRHDMDSLAERYLDRKTLHYEDVAGKGAKQIPFARVSVEDACRYAAEDA
DVTLCLHRALWPRLESIPSLRAVYETIEIPLVPVLSRIERAGVLVDVYKLAEQSRELERR
MAEVEAEARAVAGETFNLGSPKQIQTILYDKLGLPVIKKTPTGQPSTDESVLQDLAETFE
LPRLILEYRSLSKLKSTYTDKLPHQVNPVSGRVHTSYHQAVAATGRLSSSDPNLQNIPVR
TEEGRRIRQAFVAPPGHKLLAADYSQIELRIMAHLSGDANLLAAFAEDADVHRATAAEVF
GVALEEVTSSQRRSAKAINFGLIYGMSAFGLAKQLGIQQKLAQGYIDLYFARYPGVRAYM
DRTRESARELGYVETLFGRRLHVPDIQSRNGQRRQYAERTAINAPMQGTAADIIKRAMIA
LDAWIESSGAPLRMIMQVHDELVFEVAEDFVSEATATVREHMSRAAELAVPLMVDIGTGD
NWDEAH
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgcctgtgtccgacacctctccgctcctcgtcctcgtcgacggatcctcttttctgtac
cgcgccttctttgccctgccgcctctgaccaactcccacggggagccgaccggggccgtc
tatggcgtcatcaacatgttgcgcaaattgttgcagacctacgacggcgcccacatcgcc
gtggtgttcgacgcgccggggcggaatttccgcgacgagctcttcgagcattacaaagcg
caccgcccgcccatgcccgacgatctgaggagccagatcgagccgctgcaccaggtggtg
cgggcgatggggctgccgatgctgatcgagccgggggtggaggcggacgatgtcatcggc
accctggcgaggcaggcggtggaacggggcttccgggtggtgatttcgaccggcgacaag
gacatggcgcaactggtgtgtgaccgggtgactctggaaaacaccatgttcgacagccgg
ctcgacgtcaacggcgtgatcgtcaagttcggcgtcccgcccgagcgcatcgtcgactat
ctcgccctggtcggagacacctcggacaacatccccggcgtgccaaaggttggccccaaa
accgccgcgaaatggctggccgaatacggttcgctcgatgcgctgatcgcccgcgccgga
gaaatcggcggcaagaccggtgagaacctccgcgccagtctggagctgatcccgctctcg
cgcgaactggccaccatccgttgcgacctcccgctgccgctgacgccggaatccctggag
cggcggccgccggacaaggccgctttgcgcgagctgtatactcggctggaattcaagacc
ttgctccggcaactggacgccgaagcggacgacccgaaggccgctcctcccgtcgccgcg
gcgccggaagtccaaacacgctaccaggcggtcatggacccggccgcattcgaccgctgg
ctggagaaactcgaagcggccgagctcttcgccttcgataccgagaccagcagtctggac
tacatgcgcgccgaggtcatcggcctgtccttcgcggtcgagccgggcgcggcggcctat
gtgccgctggcgcacgactaccccggtgcaccgccccagctcgaccgggccatggtgctg
gagcgcctgcggccgctgttggaggacccgggcaaggccaaactgggccaacacctcaag
tacgatgccaatgtgttgctcaaccatggcatcatgctgcgcggcatccgccacgacacc
atgctcgagtcctacgtgctgaacagcacggccacccggcatgacatggactcgctggcc
gagcgctacctggaccgcaagaccctccattacgaggatgtcgctggcaagggtgcgaag
cagatcccttttgcccgggtttcggtcgaggacgcttgccgctatgccgccgaggatgcc
gacgtcacgctgtgcctgcatcgggcgctgtggccccgactcgagagcataccttcactg
cgggctgtgtacgagaccatcgagatcccgctggtgccggtgctgtcccgcatcgaacgt
gccggcgtgctggtggacgtgtacaagctggcggaacagagccgcgagctggaacggcgc
atggcggaggtcgaggccgaggcccgggccgtggcgggtgagaccttcaatctcggctca
cccaagcagatccagaccatcctgtacgacaagcttgggctgccggtcatcaaaaagacg
ccgaccggccagccgtccaccgacgagtccgtgcttcaggatctggccgagactttcgag
ctgccgcggctgatcctggaataccgctcgctgtccaagctcaagtccacttacaccgac
aagctgccgcaccaggtgaatcccgtcagcggccgggtccacacatcctatcaccaggcg
gtggcggcgaccgggcggctgtcttcgtccgaccccaatctgcagaacatcccggtgcgg
accgaggaaggccgccgcatccgccaggccttcgtcgcgccgcccggccacaagctgctg
gcggcggactactcgcagatcgaactgcggatcatggcgcatttgtcgggcgacgcgaac
ctgctcgccgccttcgccgaggacgccgacgtccaccgcgccaccgccgccgaggtgttc
ggtgtggcgctggaagaggtgacgagcagccagcgccgttccgccaaggccatcaacttc
gggttgatctatggcatgtccgccttcggactggccaagcagctcggtatccagcagaag
ctggcgcaaggttacatcgacctctacttcgcccgctatcccggcgtgcgcgcctacatg
gaccgtacccgcgaatcggcgcgcgagttggggtatgtcgaaaccctgttcggccgccgc
ctgcacgtgccggacatccagtcccgtaacggccagcgccgccagtacgccgagcgcacg
gcgatcaacgcgcccatgcagggaacggccgccgacatcatcaagcgcgcgatgatcgcc
ctggacgcctggatcgaatccagcggggcgccgttgcggatgatcatgcaggtgcatgac
gagctggtgttcgaggtggccgaggatttcgtgtccgaagccaccgccaccgtgcgtgag
cacatgagccgtgccgccgaactcgcggtgccgctgatggtcgacatcggcaccggcgac
aactgggatgaggctcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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