KEGG   Macrococcoides canis: MCCS_07360
Entry
MCCS_07360        CDS       T04838                                 
Symbol
rnr
Name
(GenBank) Ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mcak  Macrococcoides canis
Pathway
mcak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MCCS_07360 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcak03019]
    MCCS_07360 (rnr)
   03016 Transfer RNA biogenesis [BR:mcak03016]
    MCCS_07360 (rnr)
Enzymes [BR:mcak01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     MCCS_07360 (rnr)
Messenger RNA biogenesis [BR:mcak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MCCS_07360 (rnr)
Transfer RNA biogenesis [BR:mcak03016]
 Prokaryotic type
  tRNA degradation factors
   MCCS_07360 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 RNase_II_C_S1 Rho_RNA_bind Spt6_S1 HEPN_Swt1
Other DBs
NCBI-ProteinID: ARQ06386
UniProt: A0A1W7AAE6
Position
683895..686219
AA seq 774 aa
MHLYEHEVIAYLKSLKGSAVMIEAIEAHLNLESADAFKDLVKTLVHLEQTGKLSRTKQDK
YFIAFDSNKALVKGTLSQHKKGFAFVRAEDETIDDVFIPPNKINRAMDGDTVLVSVTKAR
DGRNEGEVKAIEKRAITQVVGTYTEAKHFGFVLPDDSRITQDIFIPKGKNLGAVEGHKVL
VELTQYADGTNNPEGMVKAILGHKNDPGVDILSIIYQHGINIEFNPATIEEANNVPDEIS
PSEITGRTDLRDVLTITIDGADAKDLDDAISVDKLDNGNYRLIVSIADVSHYVTEGSSLD
ADAYERGTSVYLVDRVIPMIPHRLSNGICSLNPHADRLTLSCEMEITPNGHTVNHKIYES
IIHSDERMTYDDVNAILEDNDAALINKYAHIHELLLHAKDLAAILKRMRETRGEIDFDLK
EAKILVDKDGVPREVAIRDRGLGERLIELFMLAANETVAEHFAKMKVPFIYRVHEEPKAD
RLKRFFEFITNFGILVKGGTENIHPKTLQNIGKEIHGKPEELVISTLMLRSMQQAKYAEE
NLGHFGLSAEYYTHFTSPIRRYPDLIVHRLIRKYLIEKSMDDKAQEYWAEELVDISEHTS
KRERRAIDAERDTDDLKKAEYMVQHIGEEFDGIISSVANFGMFVELENTIEGMVHNSNMT
DDYYNFDERHMAMIGERHGKVYRIGQKVRVKVVNVNVDERMIDFAIVGMDMKKIEDKIRE
VKIKAKKNTKSTNEKPRKKGRGKARGAEMSKNNKNKKPFYKAKAVKNSGRRKKK
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgcatctgtatgaacatgaagtaattgcatatttaaaatcattaaagggtagtgcagtt
atgatagaagcaattgaagcgcatctaaatcttgagagtgcagatgcatttaaagattta
gtaaagacccttgtgcatttagaacagacaggtaaattgagccgtacaaagcaggataag
tactttattgccttcgacagcaataaagcgctcgtaaaaggtacgttaagtcagcacaaa
aaaggctttgcatttgttagagcagaggatgaaacgatcgatgacgtgtttattccaccg
aataagattaatcgtgctatggatggagacacagtgcttgtcagtgtaacaaaagcacgt
gacggtcgtaatgaaggtgaagtaaaagccattgaaaagcgtgcgattactcaagttgtc
ggtacatacactgaagcgaaacatttcggctttgtattaccggatgactcaagaattaca
caagatatctttattccaaaaggcaagaacctaggggcagtagaaggtcataaagtgctt
gtagaacttacgcagtatgctgatggtacgaataatcctgaaggtatggtaaaagctatt
cttggtcataaaaatgatccaggtgtggatatcttatcgatcatctatcagcatgggatt
aatatagaatttaatccagcgacgattgaagaagcaaataatgtaccggatgaaattagt
ccttcagaaattacaggacgtacagatttacgtgacgttctgacaattacaattgatggt
gcagatgcgaaagacttagatgatgcaatcagcgtggataagctggataatggtaactac
cgcctgatcgtctctattgcagatgtcagtcattatgtaacggaaggatctagtcttgat
gcagacgcttatgaacgtggtacaagtgtgtatttagtggaccgtgtaattccaatgatt
ccgcatcgactcagtaacggtatttgttcgcttaatccacatgcagatcgtttaacatta
agctgtgagatggaaattactccaaatggtcatacggttaatcataaaatctatgaaagt
atcattcattccgatgaacgtatgacttatgatgatgtgaatgcaatattagaagataac
gatgcagcgctgatcaataaatatgcgcatattcatgaactgctattacacgcgaaagat
ttagcagcaatacttaaacgtatgcgcgaaacacgtggagaaattgatttcgaccttaaa
gaagcgaagatattagttgataaagacggtgtccctagagaagttgcaatacgagaccga
ggactcggcgaacgtttaatcgaattatttatgcttgcagcaaatgaaactgttgcagaa
cactttgcgaagatgaaagtaccgtttatctaccgcgtgcatgaagaaccgaaagcagat
cgcctgaaacgcttctttgagtttattacaaacttcggtattttagttaaaggcggcact
gagaacattcatccgaagacgctgcagaatatcggtaaagaaattcacggaaaacctgaa
gaacttgtaatctcaacacttatgctacgctcaatgcagcaggcaaagtatgcagaagag
aacttaggtcacttcggattatcagctgaatattatacgcactttacatcaccaatccga
cgctatccagatttaatcgtgcacagactaatccgtaaatacttgattgaaaagtcgatg
gacgataaagcacaggagtactgggcagaagaactggtcgatattagtgaacatacatct
aaacgcgaacgccgtgccattgatgcggaacgtgatacagatgatctgaagaaagcagaa
tatatggtgcagcatatcggagaagaatttgacggtatcatcagcagcgttgcaaacttc
ggtatgttcgtcgaacttgagaatacgattgaaggtatggttcataattcgaacatgaca
gatgattactataactttgatgaacgtcatatggcgatgatcggtgaacgtcacggaaaa
gtgtatagaatcggtcagaaagtacgcgtaaaagtagtgaacgtcaatgtagatgaacgc
atgattgactttgcgattgttggtatggatatgaagaagattgaagataagattcgcgaa
gtgaaaattaaagcgaagaagaatacgaaatctactaacgaaaaaccccgtaaaaaagga
cgcggaaaagcacgtggcgcagaaatgagtaagaataataaaaataagaaaccgttctat
aaagcaaaagcggtgaaaaattcaggacgtagaaagaagaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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