KEGG   Mus caroli (Ryukyu mouse): 110284121
Entry
110284121         CDS       T05910                                 
Symbol
Cldn6
Name
(RefSeq) claudin-6
  KO
K06087  claudin
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04514  Cell adhesion molecules
mcal04530  Tight junction
mcal04670  Leukocyte transendothelial migration
mcal05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110284121 (Cldn6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110284121 (Cldn6)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    110284121 (Cldn6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    110284121 (Cldn6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mcal03037]
    110284121 (Cldn6)
   04147 Exosome [BR:mcal04147]
    110284121 (Cldn6)
Cilium and associated proteins [BR:mcal03037]
 Other cilia and associated proteins
  Stereociliary proteins
   110284121 (Cldn6)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   110284121 (Cldn6)
  Exosomal proteins of colorectal cancer cells
   110284121 (Cldn6)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 GPDPase_memb
Other DBs
NCBI-GeneID: 110284121
NCBI-ProteinID: XP_021005418
Ensembl: MGP_CAROLIEiJ_G0021153
UniProt: A0A6P5NRK7
Position
17:19514032..19517117
AA seq 219 aa
MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVVTLLIVLLGLLVYLAGAKCTTCVEDKNSKSRLVLI
SGIIFVISGVLTLVPVCWTAHSIIQDFYNPLVADAQKRELGASLYLGWAASGLLLLGGGL
LCCACSSGGPQGPRHYMACYSTSVPHSRGPSEYPTKNYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcctctactggtctgcaaatcttggggatcgtcctgaccctgcttggctgggtcaac
gccctggtgtcctgtgccctgcccatgtggaaggtgaccgccttcatcggcaacagcatc
gtcgtggcccagatggtgtgggaggggctgtggatgtcctgtgtggtccagagcactggc
cagatgcagtgcaaggtgtatgactcactgttggcgctaccccaggacctgcaggctgcc
agagccctctgtgttgtcaccctcctcattgtccttcttggcctgctcgtgtacctggcc
ggagccaagtgcactacctgtgtggaagataagaactccaagtctcgtctcgtgctcatc
tctggcatcatctttgtcatctctggggtcctgacgctcgttcctgtctgctggactgct
cactctatcatccaggacttctacaaccccttggtggctgatgctcaaaagcgggagctg
ggggcctccctctacctgggctgggcagcctcaggccttttgctgctaggtggagggcta
ctatgctgcgcctgctcttctggagggccccagggacccagacattacatggcctgctat
tctacatctgtcccacattctcggggaccctccgaatatcccaccaagaattatgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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