KEGG   Mus caroli (Ryukyu mouse): 110286667
Entry
110286667         CDS       T05910                                 
Name
(RefSeq) protocadherin-11 X-linked isoform X1
  KO
K16498  protocadherin delta 1
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mcal01009]
    110286667
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mcal04515]
    110286667
Protein phosphatases and associated proteins [BR:mcal01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110286667
Cell adhesion molecules [BR:mcal04515]
 Cadherins
  Protocadherins
   110286667
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Rib SusE OPA3
Other DBs
NCBI-GeneID: 110286667
NCBI-ProteinID: XP_029329016
Ensembl: MGP_CAROLIEiJ_G0033368
UniProt: A0A6P7QTR9
Position
X:112941536..113491235
AA seq 1168 aa
MIPFLPALGPSGCRDVYRGLTNSTFGIETGMDLLSGTYIFAVLLACVVFQSGAQEKNYTV
REEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGAR
IDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPE
NSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDRE
EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQ
LHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLAT
DGGSTPARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSENAPLNTKIALITVMDKDS
EHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSS
MLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAP
PEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIF
THNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNIS
FDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTN
PGTVVFKVVAIDDDIGMNAEVHYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVI
VKANDLGQPDSLFNVVNVNFFINESVPNATLIYELVRRSIDAPANQNTDTTSASSPTTDY
VKIMVAIVAGTITVVLVIFITAVVRCRQPPHLKASQKNKQNSEWVTPNPENRQMIMMKKK
KKKKKKHPPKNLLLNFVTIEEAKPDDGENERNSVTLDLPIELEEQTMGKYNWGTTPTTFK
PDSPDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVGCDSISKCSSSSSDPY
SVSECSYPVTTFKAPVSVHIRPTMKEVVRSHTPMKEATTVEIWTHPHPQRRSDGKKPGKS
QRRVTFHLPEGSQESISDGGLGDHDTGSLPSTSHALPLGYPQEEYFDHAAPNNRTEGDGN
SDPESIPLHPSKTTASRSFHIHHPLLSN
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgatcccatttcttcctgccctgggacctagtggatgtagagatgtatatcgtgggctg
acaaacagtacctttggtattgagactggtatggacttgttgtccgggacgtatatattt
gcggtcctgttagcatgcgtcgtgtttcagtctggcgcccaggagaagaattatacagtc
cgagaagaaatgccagaaaacgtcctgataggcgacttgttgaaagacctcaacttgtcg
cttattcccgacaagtccttaaccactcctatgcagttcaaattagtttacaaaaccggg
gatgtaccattgattcgcattgaagagggtactggagagatcttcactactggtgcacgc
attgatcgtgagaaattatgtgctggaatcgtgttggatgcccgttgcttttacgaagtg
gaggttgctgttttgccggatgaaatatttcgattggttaagatacgctttctgatagaa
gacataaatgataatgcaccgttattcccaacaactgtcatcaacatatcaattccagag
aactcggctataaactctcgatattctcttccagcagccattgatcctgacattggaata
aatggagtccaaaattaccaactaattaagagtcaaaatattttcggacttgatgtcatt
gaaacaccagaaggagacaagatgccccaactgattgttcaaaaggagttagatagagaa
gagaaggatacctatgtgatgaaagtaaaagttgaagatggtggctttcctcaaagatcc
agtacagctattttgcaagtaagtgttgctgatacaaacgacaatcacccaatcttcata
gagaaggaaattgaagtcagtataccagaaaatgctcctataggttcttcagtgacacag
ctccatgccacagatgcagatataggtgagaatgccagaattcacttttatttcagcaac
ctagtctccaacatcgctaagagactgtttcatcttaacaccactactggacttatcact
gtcaaagaaccactggatagggaagaatcaccaagtcacaagttattggttttggcaact
gatggtggatcaacaccagcaagagcaacggtgctggtaaatgtcacagatatcaatgat
aatgtcccatcaattgacataagatacattgtcaatccaaccaatggcaccgtgcttctt
tcagagaatgctccacttaacactaaaattgctctcataactgtgatggataaggattct
gaacataatggtagggtgacatgcttcacagatcatgaagttcctttcagattgcgacca
gtattcagtaatcagtttctcttggagactgctgcatttcttgactttgagtccacaaga
gaatatgccataaaattactggccgctgatgctggcaaacctcctttgaatcagtcatcc
atgctcctgatcaaagtaaaagatgaaaatgacaatgctccagttttcacccagtctttc
ataagcctttctgttcctgagaataactctcctggtgcacagttgacaaaaatcagtgca
acagatgcagacagcggacagaatgctgaaataagctacatgctaggttttgatgcacca
cctgaattcaatctggatcaacgtacaggcatcctgactgcagtgaagaaactagatagg
gaaaaacaggaaaagtattactttacagttttggcacaggacaatggaattccaccctta
atgtccaatgccactgtcttcgtgactgttcttgaccagaatgataatagcccaattttc
actcataatgaatataacttctatgttcctgaaagccttccaaaacatggcacagtaggg
ctaataactgtgactgatcctgattacggagagaattctgcagttaccctctccatctta
gatgtgaatgatcaattcactattgatccacagtctggtgtcatcaggccaaatatttca
tttgacagagaaagacaagaatcctatactttctatgtaaaagctgaggatggtggtagg
gtatcacgttcttcaactgctagagtaaccataaatgtggttgatgtcaatgataacaaa
ccaatttttattgaccctccttccaattactcctttgaatgggttctaccatccacaaac
cctggcacagtcgtcttcaaggttgtcgcaattgacgatgatattggcatgaatgcagag
gttcattacagcattgttggaggaaatacaaaaggactgtttatgattgaacaaacatca
ggtaacatcacattgaaggagaagtgcatggtttcagatcttggtttacaccgagtcata
gtcaaagctaatgatttagggcaacctgattctctcttcaatgttgtaaatgtcaatttc
tttataaatgagtccgtgcccaatgccacactgatttatgaactggtgcgcagaagcatt
gacgcacctgcaaatcaaaatactgacacaaccagtgcatcctcaccaaccactgactat
gtcaagatcatggtggccattgtggctggcaccataactgttgtcctagttattttcatc
actgctgtagtaagatgccgccaaccaccacaccttaaggcttctcagaaaaacaaacag
aattctgagtgggttactccaaacccagaaaacaggcagatgattatgatgaagaagaag
aagaaaaagaagaagaagcatccccccaagaacttgctgcttaattttgtcactattgaa
gaagcaaagccagatgatggtgaaaatgagagaaatagtgtcacactagatcttcccatt
gagctggaagagcaaaccatgggcaaatacaactggggcactacacctactactttcaag
cctgatagccctgatttggctcgacactacaaatctgcctctccccagcctgcattccag
atccagcctgaaactcccctgaactcaaagcaccacatcattcaggaactgcctcttgat
aataccttcgttggctgtgattccatctccaagtgttcctccagcagttctgatccctac
agtgtttctgagtgtagctatccagtgacaactttcaaggcccctgtgtctgtgcatatc
agaccgacaatgaaggaggtggtacgatctcacacacccatgaaagaggcaaccactgtg
gaaatctggactcatccacatccacagcggcgatctgatgggaaaaaaccaggaaagtcc
cagagacgtgtcacatttcacctaccagaaggctctcaggaaagcatcagtgatggtgga
ttgggagaccacgatacaggcagccttcccagtacatcccatgcactgcctcttggctat
cctcaggaagagtattttgatcatgctgcaccaaacaaccgcactgaaggggatggcaac
tctgatcctgaatctattcctctgcatccttccaagaccactgcctccagatccttccat
atccaccaccctctactctcaaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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