KEGG   Mus caroli (Ryukyu mouse): 110290859
Entry
110290859         CDS       T05910                                 
Symbol
Ift80
Name
(RefSeq) intraflagellar transport protein 80 homolog
  KO
K19678  intraflagellar transport protein 80
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mcal03037]
    110290859 (Ift80)
Cilium and associated proteins [BR:mcal03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   110290859 (Ift80)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Coatomer_WDAD
Other DBs
NCBI-GeneID: 110290859
NCBI-ProteinID: XP_021013361
Ensembl: MGP_CAROLIEiJ_G0025062
UniProt: A0A6P5PJA4
Position
3:complement(62353017..62456150)
AA seq 777 aa
MRLKISLLKEPKHQELVSCVGWTTAEELYSCSDDHQIVKWNLLTSETSLIVKLPDDIYPI
DLHWFPKSLGIKKQTQAESFVLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTA
LVTVGEDGQVKIWSKTGMLRSTLAQQGTPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAK
VLQWKAHDGIILKVDWNSVNDLILSAGEDCKYKVWDSYGRVLYGSQPHEHPITSVAWAPD
GELFAVGSFHTLRLCDKTGWSYALEKPNTGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE
QRWEWKNFQVTLTKRRTMQVRNVLNDAMDLLEFRDRVIKASLNHAHLVVSTSLQCYVFST
KNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGIYLHSYEGRFISSPKFPGMRTDILNAQ
TVSLSNDTIAIKDKADEKIIFLFEASTGKPLGDGRLLSHKNEISEIALDQKGLTNDRKIA
FIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWCDTCNILCGIQDTRFTVWYYPNTIYV
DRDILPKTLYERDASEYSKNPHIVSFVGNQVTIRRADGSLVHISISPYPAILHEYVSSSK
WEEAVRLCRFVKEQSMWACLAAMAVANRDMVTAEIAYAAVGEIDKVRYINAIKDLPSRES
KMAHILMFSGNIQEAETVLLQAGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQ
KFLETFGKQETNKRYLQYAEGLQIDWEKIKAKIEMEITKERDRPSSGQSSKSVGLKH
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgagactgaagatatctctgttaaaggaaccaaagcatcaagaattagtgagctgtgtg
ggttggactacggcggaggagctgtactcatgcagtgatgaccaccagatagtcaagtgg
aacctgctaaccagtgaaaccagcctaatagtcaagctgcctgatgacatctacccgata
gaccttcactggtttccaaagagtttaggcataaagaaacagacgcaggcagaaagcttc
gtcctcacaagctctgatggtaagtttcatctgatttccaagttaggaagagtggaaaag
agtgtagaagctcactgtggggctgtgctcgcaggaagatggaattacgaggggactgca
ttagtgacagttggagaagatggacaagtgaaaatctggtcaaagacggggatgctcaga
tcaactttagcccagcaaggaacaccagtgtattcagtagcctggggccctgattcggaa
aaggttctttatacagcaggcaaacagctcatcattaaacctcttcaaccaaatgctaaa
gttttacagtggaaagcccatgatggcatcattttaaaagtcgactggaactcagtgaat
gaccttattttatctgcgggtgaagactgtaagtataaggtttgggatagttatggccgc
gtgctgtacggctcccagcctcatgagcaccccatcacctcagtggcctgggctccagat
ggggagttatttgccgttggatcgtttcatacgttacgcttgtgtgataaaactgggtgg
tcatatgctttagagaagcccaacactggcagcatatttaacatcgcgtggtctattgat
ggcactcagatcgcgggagcctgtgggaatgggcatgttgtctttgcacatgtggtggag
cagcgctgggagtggaaaaattttcaagtaacactaacgaagagaaggaccatgcaggtt
cgcaacgttctcaatgatgccatggatctactggagttccgggacagagtcattaaagca
tccttaaaccatgcacacttggttgtctcaacgtctctccagtgctatgtgttctctacg
aagaactggaatacaccacttatatttgatctcaaagaaggaaccgttagtttaattctg
caggcagaaagacattttcttctggtggatggcggtggtatctacctgcactcttatgaa
gggcgcttcatttcttctccaaagtttcctggcatgagaacagacatcctgaacgctcag
actgtgtctctgagcaatgacacgatagcaataaaggacaaagctgacgagaagatcatc
ttcctctttgaggcttcaactggaaaacccctaggggatgggagacttctttctcataag
aatgaaatctcagaaattgctctggatcaaaaaggacttaccaatgacagaaaaattgct
ttcattgacaagaacagagatctctatatcacctccgtgaaacgatttgggaaagaagaa
cagattattaaacttggaaccatggtacatactttggcgtggtgtgatacatgcaatatc
ctctgcggaattcaagatactcggttcacagtatggtattatcctaataccatttatgtg
gacagagacattctgcctaaaacattgtacgaaagagatgcaagtgaatatagtaaaaac
ccgcatatagtgagttttgttggaaatcaggtaactataagaagagctgatggctccctg
gtacacatcagcatatcaccgtaccctgccatcctccatgagtacgtgagcagctccaag
tgggaagaggctgtaagactttgccgctttgttaaggagcaaagcatgtgggcttgccta
gcggctatggctgttgctaatcgagatatggtcactgcagaaatagcctatgcagcagtt
ggggaaattgataaagttcggtacatcaatgctataaaagatcttccatctagagagtca
aaaatggcccacatactaatgtttagtgggaacatccaggaggctgaaacagtcctgctc
caggctggccttgtttatcaagccatacagatcaacattaatctctataactgggaaagg
gcgctggagttggctgtaaaatacaaaacccatgttgatacagttcttgcttatcgtcaa
aagtttttggagacatttggtaaacaggaaactaataaacgatatttacaatatgcagaa
ggtctccaaatagactgggagaaaatcaaagccaaaattgagatggaaattactaaagaa
cgagaccgaccatccagcggccagtccagcaagagtgtgggcttaaagcactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system