KEGG   Mus caroli (Ryukyu mouse): 110291008
Entry
110291008         CDS       T05910                                 
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
  KO
K14314  nuclear pore complex protein Nup210
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03013  Nucleocytoplasmic transport
mcal05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110291008 (Nup210l)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110291008 (Nup210l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110291008 (Nup210l)
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110291008 (Nup210l)
SSDB
Motif
Pfam: Big_2 T2SS-T3SS_pil_N DUF4097 MAPKK1_Int
Other DBs
NCBI-GeneID: 110291008
NCBI-ProteinID: XP_021013605
Ensembl: MGP_CAROLIEiJ_G0025225
UniProt: A0A6P5PDY7
Position
3:82871444..82991808
AA seq 1881 aa
MIAFGAPRPGTFRLLFSLTPHYFFLFLIGTLANKLNVPQVLLPFSREPGRVPFLLEAQRG
CYIWHSTHHDAVTIQPLYENGTSCSQRAVLVAESTQPIRLSSIILAREVVTDHELRCDVK
VDVIDNIEIVSRTRELYVDDAPLELMVRALDSKGNTFSTLAGMVFEWSIAQDNESSREEL
SSKIRILKYSEAEYSPPDYIIEMEKEERQGDVILVSGMRTGAAVVKVRIYEPFYKKVAAA
LIRLLVLENIFLIPSHDTYLLVGAYIKYRVAKMVQGRMTEVNFPLEHYTLELQDHRLTNG
GLPSRTVALLDEKTAMVTAVQLGQTNLVFVHKNVHMRSVSGLPNSTIYVVEPGFLGFSIH
PGGRWSLEVGQVYVITVEVFDKSSTRVYISDNLKITFQFSKEYFEEQLSTSNGSYHVVKA
LKDGVVVINATLTSSLQERNSSQPKTYQISHQQEVKIYFPIQLKPSFLAFPHHPLGISNR
FTVQVEGGSGNFTWSSSNETVAMVTTKGVVTAGQVRGNSTILARDVQNPSRSGDIKVYVM
KLNKMELLPFQADVEIGQIIEVSIAMYHVNTETKEAIAFTDCSHLPLDLNSDKQGVFTLF
KEGIQKPGAMHCSSVHIAATSPGHTLVTVSVTGHEEHVWSSATFAAYEPLKALNPVDVAL
VTWQSVKEMVFEGGPHPWILEPSRFFLELSMEKAEAITVAEVRLPGKRKQNQYVYLVLCL
ELGEQVLTFRIGNHPGVLNPSPSVEKVQVRFICAHPASMLVTPMYKVPAGTQPCPLPQYN
KQLIPVSSLRDSVLELAVFDQHGRKFDNFSSLMLEWKSSNETLAHFEDSKSVEMVARDDG
SGQTRLHGHQILKVHQMKGTVLIGVNFAGYSGKKSPKGISNSPRSAGVELLLVEDVTVQP
ENATIYNHPDVKEIFNLVEGSGYFLINSSEKDIVTITYREAESSVQLVPAHPGFLTLEVY
DLCLAYLGPAVAQIRVADIQEVELDLIDKVEIGKTVLVVVRVLGSSKHPFRNKYFRNMEV
RLQLASAIVTLRLMEDQDEYSENYMLRAVTVGQTTLVAIATDRMGRKFTSAPRHIEVFPP
FRLVPEKMTLIATNMMQIISEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKSVGTAVLHG
TIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLVTATEMPVYVMGVTSTQTPFS
FSNASPSLTFHWSMSKRDVLDLVPRHSEAFLQLPAENNFAMVVHTKAAGRTTIKVTVRSK
NSSFGQLEGNLLELSDEIQILVFEKLQLFYANCQPEQILMPMNSQLKLHTNREGAAFVSS
RVLKCFPNSSVIEEDGGGLLRSGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRLS
SYPKLYTAQGRTLSAFPLGMSLTFIVEFYNNIGEKFHTHNTRLYMALNRDDLLLIGPGNR
NYTYMAQAVNKGVTVVGLWDQRHPGMADYIPVAVEHAIEPDTKLIFVGDVICFSTQLVNQ
HGEPGVWMISTNNIVQTDTVTGVGVARSPGTATIFHDIPGVVKTFREVVVNASSRLTLSY
DLKTYLTNTPNATVFKLFISTGRNVNLKGSCTPSQALAVEKVLLPETLMLCHVQFSNTLL
DIPASKVFHIHSEFSVEKGVYVCLIKVRQESEELRQVLSVADTSVYGWATLVSERGKNGM
QRILIPFIPGFYMNQSEFVLGHKDTGELRILGVERVLESLEVFHSSPFLAVSGHKHSMLP
TGLTVYLVRIINFTAFQQISSPAFINVSCALTNQQEAVIVRAKDASGADHCEDSGVFKNF
FGSYQILLFTLFAVLASTSFIFLAYNAFLNKVQTIPVVYVPTIGTTQPGSYTATCSPPHF
LSSRPPLVQSRLQHWLWSIKH
NT seq 5646 nt   +upstreamnt  +downstreamnt
atgattgcctttggggctccgcgacccggaaccttcaggctccttttctccttgactcca
cactacttcttcctgtttttaattgggaccctggccaacaaactcaatgtgcctcaagtg
ttactacctttcagccgggagccaggccgggtgcccttcttgctagaggcgcagcggggc
tgctacatctggcattccactcatcatgatgcagttaccattcagcctttatatgaaaat
ggtacctcgtgctcccaaagggctgttcttgttgctgaatccacccaaccgatacgcctc
agcagcatcattcttgctcgagaagtggtgacggaccatgagctacgctgtgatgtaaag
gtcgatgtgatagacaacattgaaattgtatctcgaacccgggagctgtatgtggacgat
gcaccgctggagcttatggtgagggccctggattctaaaggaaacactttcagtactctg
gcaggcatggtgtttgagtggagtattgcccaggacaacgagtcatcgagggaagagctg
tccagcaaaattaggattctgaaatactcggaagccgagtattctccccctgactatata
attgagatggaaaaagaggagagacaaggagacgtgattttggtatctgggatgagaact
ggggctgctgttgtaaaagtccgaatttatgagccattctacaagaaagtggctgcagcc
ttgatccgcctgcttgttctggagaacatatttcttataccatcccacgatacatatctc
ttagtaggagcctatattaaatacagagtggcaaaaatggttcaagggagaatgacagag
gtaaactttcccttggaacattatacattagaactgcaagaccacagacttaccaatggt
ggacttccgtctagaacagtggctctgttggatgagaaaacagccatggtgactgctgtc
caactgggccaaactaaccttgtctttgtccacaaaaatgttcatatgcgctctgtgtct
ggactcccaaactctaccatatatgttgtagagcctggatttttaggcttcagcatccat
cctggaggccgatggagcctagaggtggggcaggtgtacgtcatcacagtggaagtgttc
gacaagagcagcacaagggtctacatttctgacaacctcaagatcacgttccagttttcc
aaggagtactttgaagagcagttgagtacttcaaacggatcttaccatgtggtaaaagcc
ctgaaagacggagttgtggtgataaatgcaaccctgacctccagccttcaggagagaaac
agttcccagccaaaaacctatcaaatcagtcatcaacaagaggtgaagatatactttccc
attcagcttaaacccagctttctggcctttccccatcatcccctgggaatatcaaatcgg
ttcacagttcaggtagagggaggtagtggcaacttcacctggagctcttctaacgaaacc
gttgccatggttaccaccaaaggggtggtaaccgcgggccaggtgagagggaacagcacc
attttggcacgagatgtacagaatccctctcgatctggagatattaaggtgtatgtcatg
aagctgaacaaaatggaactgttgccatttcaagctgatgtggaaattggccagattatt
gaggtatccattgcaatgtatcatgtaaatacagagaccaaggaggccatcgcattcaca
gactgctcgcacttacccctcgatctcaactcggataagcaaggagtcttcactcttttt
aaagaaggtattcagaagcctggagcgatgcactgttctagtgtccacatagcagccaca
tctccgggccacactctggtgaccgtcagtgtgactgggcatgaagagcatgtgtggagc
agcgccacatttgctgcttacgaacctctaaaggctctaaaccctgtggacgtggctttg
gtgacatggcagtccgtgaaggaaatggtatttgaagggggccctcatccttggatcttg
gagccgtcccgattttttttggagctgagcatggagaaggcagaggccattacagtagca
gaagtccgactgccgggtaagaggaagcagaaccagtatgtctaccttgtgctgtgcctg
gagttaggggaacaggttctcacttttcggatcgggaaccacccgggagtcctaaaccct
agtccctctgtggaaaaggtgcaggtgcgcttcatctgtgcccatcctgccagtatgttg
gtgacaccaatgtacaaggtgccagctggcacccagccatgtcctttgccacagtacaac
aagcaactgattcctgtgtccagcttaagggactcagtcctagaactggcagtatttgat
caacacgggaggaagtttgataatttcagctcactcatgctagaatggaagtcttccaac
gagacactcgctcattttgaagattctaagtcagtggagatggtagccagagacgacggc
agtgggcagacccgactgcacggccatcagatccttaaggtgcatcagatgaaggggact
gtgctcattggagtcaattttgctggttattcagggaagaaaagcccaaaaggaatttcc
aactcgccaagatctgcgggggtagaactgctcctggtggaagacgtcacggtccagcct
gagaatgccaccatctacaaccaccctgatgtgaaggaaatatttaaccttgtggaagga
tctggctactttctgatcaacagcagtgagaaagatatcgtcaccattacttacagggaa
gcagaaagctcagtccagttagttccagcacatcctggatttctaaccctggaagtgtat
gacctgtgcctggcctacttgggtccagcagtggcccagatcagggtggcagacatacag
gaggtcgagctggatctgatcgataaggtcgagatcggtaaaaccgtgttagtggttgtg
agggttcttggctcgtccaaacaccctttccggaacaagtacttcagaaacatggaagta
aggctgcagctggcatctgccatcgtcaccctgagactaatggaagatcaggatgagtac
tctgaaaactacatgctccgtgctgtcactgttggacaaaccacacttgtagctattgcc
acagacagaatggggaggaaattcacatcggcgcctcggcatattgaggtctttcctcca
ttcagactagttcctgagaaaatgaccctgattgcaactaacatgatgcagataatctct
gaaggtggccctcagccccagtccatcattcacttctctatcagcaatcagactgtagct
gttgttaacaggagggggcaagttacagggaaatcagtcggcacggccgtgctccacggt
accatccagacagtgaatgaagacactggcaaagtcattgtgttctcccaggatgaagtc
caaatcgaagttgtccagctccaggctgttaggatccttgcagctgcgacccgactcgtc
acggccactgagatgccggtttacgtcatgggggtgacgagtacccagacccctttctcc
ttcagcaatgccagcccttcgctcacgttccactggtccatgagcaagagggatgtgctg
gacctggtacccaggcattcagaggcatttctacaacttccagctgagaacaactttgcc
atggttgtccacacaaaagcagctggcaggaccacgatcaaggtcacggtccgcagtaag
aacagctcctttgggcagttggaggggaatctgctagagctgtccgatgagattcagatc
ctggtatttgaaaaacttcaacttttctatgcaaactgtcaacctgagcagattctgatg
cctatgaattctcagctcaagctgcacaccaacagagaaggcgcagcctttgtgagttcc
cgtgttctcaagtgtttccctaattcctctgtcattgaagaagatggtggagggctgctg
agatctggatccattgcgggtactgcagtattggaagtcacttctatagaaccttttgga
gtcaatcaaacaaccataactggagtccaggtagcaccagtgacttaccttcgattgagc
agctaccccaagctatacacagcacaaggaaggaccctgtcagcctttcctttgggcatg
tctctcacctttattgttgagttttataataacattggagaaaaattccacacccacaat
actcggctttatatggctctgaacagagatgacttgctgcttattggaccaggaaacaga
aactatacatatatggcccaggctgtgaataaaggggtgacagttgtggggctttgggac
caaagacatcctggcatggcagattacatccctgttgctgtagaacatgccattgagcca
gacaccaagcttatctttgttggagatgtcatctgcttcagcactcagcttgtcaatcag
catggtgagcctggggtgtggatgatttctaccaacaatattgtacagacagacacggtc
actggagtaggagtggctaggagcccaggaactgcaacaatttttcatgacatccctgga
gttgtgaaaacgtttcgagaggtagtagtcaatgcatcatcaagattgacactcagctat
gacctgaagacttacctcaccaatacccccaatgcaactgtattcaaactcttcatcagc
acaggcagaaatgtcaacctcaaaggatcctgtaccccaagtcaggctttggctgttgaa
aaagttcttcttcccgagaccctcatgctatgccatgtgcagttcagcaatactttacta
gacattccagcaagtaaggtctttcacatccattcggaattcagtgtggagaaaggggtc
tatgtctgcctaatcaaggttcgacaggagtccgaggagctgcgccaagtgctcagtgtg
gcagacacctcagtctatgggtgggcaactctggtcagtgaacgtggcaagaatggcatg
caaagaatcctcattcctttcatccctggcttttacatgaaccagtcagagttcgttctt
ggccacaaagacactggggagctaagaatcctgggagtggaaagagttcttgagagccta
gaggtcttccacagctccccctttctggcagtgtctggccataagcactcaatgctcccg
acaggcctaactgtctacctagtaagaataatcaacttcactgccttccagcagatatca
tcccctgctttcattaatgtgtcctgtgcactgaccaatcaacaagaagctgtgatagtc
agagcaaaagatgcatctggtgcagatcactgtgaagactcgggtgtcttcaagaacttc
ttcggttcttaccagatcctcctctttaccctctttgctgtgctggcatcaacttctttc
atctttctagcatacaatgccttcctgaacaaggtacagactattccagttgtttatgtg
ccaacaataggaacaacgcagccaggttcttacacggctacatgttccccccctcacttc
ctgagctcacggccaccactagtgcagagtcggctacaacactggttatggagtataaaa
cactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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