KEGG   Mus caroli (Ryukyu mouse): 110296366
Entry
110296366         CDS       T05910                                 
Symbol
Rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
  KO
K12666  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal00510  N-Glycan biosynthesis
mcal00513  Various types of N-glycan biosynthesis
mcal01100  Metabolic pathways
mcal04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    110296366 (Rpn1)
   00513 Various types of N-glycan biosynthesis
    110296366 (Rpn1)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110296366 (Rpn1)
SSDB
Motif
Pfam: Ribophorin_I DNA_repr_REX1B FliD_C MTR4_beta-barrel CtIP_N
Other DBs
NCBI-GeneID: 110296366
NCBI-ProteinID: XP_021020695
Ensembl: MGP_CAROLIEiJ_G0028624
UniProt: A0A6P5Q2H6
Position
6:84182485..84201492
AA seq 608 aa
MESXVAXQXLLLLCLGALAPTPGSASSEAPPLVNEEVKRTVDLSSHLAKVTAEVVLVHPG
GGSTSRASSFVLALEPELESRLAHLGVQIKGEDEEDNNLEVRETKIKGKSGRFFTVKLPV
ALDPGSKISVVVETVYTHVLHPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTMRVKLAS
RNVESYTKLGNPSRSEDVLDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHW
GNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGN
VSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHV
FDEQVIDSLTVKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQ
HIQDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEARMKVACIT
EQVLTLVNKRLGLYRHFDETVNRYKQSRDISTLNSGKKSLETEHKAVTSEIAVLQSRLKT
EGSDLCDRVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYLENEKLSSGKRQELVTK
IDHILDAL
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggagtcgcnggtcgccttncagttnctgctgctgctatgtctnggggccttagccccg
acgcccggcagcgcctcctcggaggctccgccgctggtcaacgaggaagtgaagcgcacg
gtggacctgagcagccacctagccaaggtgacggctgaggtggtcctggtacacccgggc
ggcggctccacatcacgagccagctctttcgttctggccctggagccagaactggagtcg
cggcttgcgcacctaggcgtgcagataaagggagaagatgaggaagacaacaacctagaa
gtccgagaaaccaaaattaaagggaaaagtgggagatttttcacggtcaagctcccagtt
gctcttgatcctgggtccaagatctcggtcgttgtggaaactgtctacacccatgtgctt
catccgtatccgactcagataactcagtcagagaaacagttcgtggtgtttgaaggcaac
cattatttctactctccctatccaacaaagacccagaccatgcgagtgaaactggcntcc
cgaaatgtggaaagctataccaagctggggaacccctctcgatctgaggacgtcctagat
tatggtccttttaaagacatccctgcctacagtcaggacactttcaaagtgcattacgag
aacaatagccctttcctgaccatcaccagtatgacccgggtcattgaggtgtctcactgg
ggcaatattgctgtggaagagaacgtggacttgaagcacacaggcgcagtgctgaagggg
cctttctcccgctacgattaccagaggcagcctgacagtgggatctcctccattcgttct
tttaagaccatccttcctgctgccgcccaggatgtctattaccgggatgagattggtaat
gtttccaccagccacctccttattttggatgactctgtggaaatggaaatccggcctcga
tttcctctctttggagggtggaagacacactacatcgttggttacaacctcccaagctat
gaatacctctataatctgggtgaccagtatgcactgaagatgcggtttgtagaccacgtg
tttgatgagcaagtgatagattcgctgacagtgaagatcatcttgcccgagggagccaag
aacatccaggtggacagtccctacgatatcagccgcgccccagacgagctgcattatacc
tacctagacacgttcggccgcccagtgatcgtggcttacaagaagaatctngtcgagcag
cacattcaggacattgtggtgcactacacgttcaacaaggttctcatgctgcaggagccg
ctgctggtcgtggccgccttctacatcctgttcttcactgtcatcatctacgtccgtctg
gacttttccatcaccaaggatccagctgcagaagccaggatgaaagtggcctgtatcaca
gagcaggtcttaaccctggtcaacaagaggctgggcctctaccgtcactttgatgagact
gtcaatagatacaagcagtcccgggatatctctaccctcaacagtggtaagaagagccta
gagacagagcacaaggctgtgaccagcgagattgctgtgctgcagtctaggctgaagacg
gagggctcggacctgtgtgacagggtgagcgagatgcagaagctggacgcccaggtcaag
gagctggtcctgaagtcggcggtagaagcagagaggctggtggctggcaagctcaagaag
gatacgtacctggagaacgagaagctcagctcaggaaaacgccaggagctggtcaccaag
atcgaccacatcctggatgctctgtag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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