KEGG   Mus caroli (Ryukyu mouse): 110298007
Entry
110298007         CDS       T05910                                 
Symbol
Psen2
Name
(RefSeq) presenilin-2 isoform X1
  KO
K04522  presenilin 2 [EC:3.4.23.-]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04330  Notch signaling pathway
mcal04722  Neurotrophin signaling pathway
mcal05010  Alzheimer disease
mcal05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    110298007 (Psen2)
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    110298007 (Psen2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110298007 (Psen2)
   05022 Pathways of neurodegeneration - multiple diseases
    110298007 (Psen2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mcal01002]
    110298007 (Psen2)
Peptidases and inhibitors [BR:mcal01002]
 Aspartic peptidases
  Family A22: presenilin family
   110298007 (Psen2)
SSDB
Motif
Pfam: Presenilin DUF6541
Other DBs
NCBI-GeneID: 110298007
NCBI-ProteinID: XP_021022724
Ensembl: MGP_CAROLIEiJ_G0014975
UniProt: A0A6P5PVC0
Position
1:complement(170081014..170108864)
AA seq 448 aa
MLTFMASDSEEEVCDERTSLMSAESPTSRSCQEGRPGPEDGESTAQWRTQESEEDCEEDP
DRYACSGAPGRPSGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLAVWNFGAVGMVCIHWKGPLVLQQAYLIVISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEAFEAPLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGNGDWNTTLACFIAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgctcacattcatggcctctgacagcgaggaagaggtgtgtgatgagcggacgtccttg
atgtcagccgagagtcccacatctcgctcctgccaggaaggcaggccaggcccggaggat
ggagagagcactgcccagtggaggacccaggagagcgaagaagactgtgaagaggacccg
gaccgctacgcatgcagtggggctcctgggcgaccgtcgggcctggaggaagagctgacc
ctcaagtatggggcgaagcacgtgatcatgctattcgtgcctgtcacgctgtgtatgatc
gtggtggtggccactatcaagtctgtgcgtttctacaccgagaagaacgggcagctcatc
tacacacccttcacggaggacacgccctcggtgggccagcggctcctcaactccgtgctg
aacaccctcatcatgatcagcgtcatcgtagtcatgaccatctttctcgtggtactctac
aagtatcgatgctacaagttcatccatggctggctgatcatgtcctccctgatgctcctc
ttcttgttcacctacatctacctcggggaagtgctcaagacctacaatgtggccatggac
tatcccacactcttcctggctgtctggaacttcggggcagtgggcatggtgtgcatccac
tggaaggggcctctggtgctgcagcaggcttaccttattgtgatcagcgcactcatggcc
ctggtgttcatcaagtacctgccggagtggtctgcctgggtcatcttgggtgccatctct
gtgtacgatctcgtggctgtgctgtgccccaaagggccactgagaatgctggtggaaact
gcccaggagagaaatgagcccatatttcctgccctgatatactcatctgccatggtgtgg
acggtgggcatggcaaagctggacccctcctctcaaggagcactgcagctcccctacgac
ccagagatggaagaagactcctacgacagttttggagaaccctcataccctgaagccttt
gaagcccccctgcctggctacccaggggaggagctggaggaggaggaggaaaggggcgtg
aagctcggcctgggagacttcatcttctacagcgtcctggtgggcaaggctgcagccact
ggcaacggagactggaacactacgctggcctgctttatcgccatcctcattggcttgtgt
ctcaccctcctgctgcttgctgtgttcaagaaggccctgcccgccctccccatctccatc
acctttggactcatcttctacttctccacagacaacctggtgcgccctttcatggacact
ctggcctcccaccagctctacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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