KEGG   Mus caroli (Ryukyu mouse): 110299399
Entry
110299399         CDS       T05910                                 
Symbol
Rbbp6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
  KO
K10624  E3 ubiquitin-protein ligase RBBP6 [EC:2.3.2.27]
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110299399 (Rbbp6)
Enzymes [BR:mcal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110299399 (Rbbp6)
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110299399 (Rbbp6)
SSDB
Motif
Pfam: DWNN zf-CCHC_2 U-box zf-C3HC4_2 zf-C3HC4_3 zf-CCHC zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 110299399
NCBI-ProteinID: XP_021024742
UniProt: A0A6P5QBR4
Position
7:125087371..125119850
AA seq 1790 aa
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKTLVGPPPPSYTCFRCGKPGHYIKNCPTNGD
KNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFL
PEEPSSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPT
CHQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPVPPPRPLMQRNLQPLM
RSPISRQQDPLMIPVTSSSAHSTPSISSLTSNPSSLAPSVSGNPSSAPAPVPDITATVSI
SVHSEKSDGPFRDSDNKLLPAAALTSEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQS
LLHGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHH
SERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPAPRFPPRFPPGQPPPAGYS
VPPPGFPPAPANISTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKL
DEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRS
FSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRG
QSPTKRNVPQGETEREYFNRYREVPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWY
EKYYKGYAVGAQPRPSANREDFSXQRLLPPNISNSPFTGGHRDYAAGQSHRNRNLGGNYP
VKLSTRDSHIPKDNPKSKEKESENVPGDGKGNKHKKHRKRRKGEESESFLNPELLETSRK
SRESSGIDETKTDTLFVLPSRDDATPVRDEPMDAESITFKSVSDKDKREKDKPKVKSDKT
KRKSDGSATAKKDNVLKPSKGPQEKVDGDREKSPRSEPPLKKAKEEATKIDSVKPSSSSQ
KDEKVTGTPRKAHSKSAKEHQEAKPAKDEKVKKDCSKDIKSEKPASKDEKAKKPEKNKLL
DSKGEKRKRKTEEKSVDKDFESSSMKISKVEGTEIVKPSPKRKMEGDVEKLERTPEKDKI
ASSTTPAKKIKLNRETGKKIGNAENASTTKEPSEKLESTSSKIKQEKVKGKAKRKVAGTE
GSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQS
KWDKDDFESEEEDVKTTQPIQSVGKPSSIIKNVTTKPSAAVKYTEKESEQPEKMQKLPKE
ASHELMQQELRSSKGIASSEKGRAKDREHSGSEKDNPDKRKSGAQPDKESTVDRLSEQGH
FKNLSQSSKETRTSEKHESVRGSSNKDFTPGRDKKVDYDSRDYSSSKRRDERSELARRKE
SPPRSKESLSGQKSKLREERDLPKKGTESKKSNSSPPRDKKPHDHKAPYETKRPCEETKP
VDKNSGKEREKHAAEARNGKESSGGKLPYIPNPPDPPMEKELAAGQVEKSTVKPKPQLSH
SSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEEAVASISKDLKEKTTEKAKESLTVV
TASQPGADRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAGSQDSKKKKKKKDKKKHKK
HKKHKKHKKHAGTDGDVEKSQKHKHKKKKAKKNKDKEKEKDDQKVKSVAV
NT seq 5373 nt   +upstreamnt  +downstreamnt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacttttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatctgcagatcaccaacgcacagacgaaagaagaatacactgatgat
aatgcgctcattcctaagaactcatctgtgattgtcagaagaattcctattggaggtgtg
aagtctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagacaaaattaaagcaatgatgtcacagtctggccat
gaatacgacccaatcaattacatgaagaaaactctagtaggtccaccacctccatcttac
acctgctttcgttgtggtaaacctggtcattatattaagaattgcccaacaaatggggat
aagaactttgaatctggtcctaggatcaaaaagagcactggaattcctagaagttttatg
atggaagtgaaagatcctaacatgaaaggtgcaatgcttacaaacactggaaaatatgca
ataccaactatagatgcagaggcctatgcaattgggaagaaagagaaaccacccttctta
ccagaggaaccatcatcatcatcttcagaagaagatgatcctatcccagacgagctcttg
tgcctcatctgcaaagacattatgactgatgctgttgtcattccctgctgtggaaacagt
tactgtgatgaatgcataagaacggcactcttggagtcagatgaacatacgtgtccaaca
tgtcaccaaaatgatgtttctcctgatgctttaattgccaacaagtttttacgacaggct
gttaataactttaaaaatgaaactggctatacaaaacgactacgaaaacagttacctcca
cccccacccccagtaccaccaccaagaccactcatgcagcggaacctgcagcctctgatg
agatctcccatatcaagacagcaggatcctctgatgattccagtgacatcttcctcagct
cactcaactccctctatatcttcattaacttcaaatccatcttccctggctccttctgta
tctggaaatccatcttctgccccagctccagtacctgatataactgcaactgtgtctata
tcagtccattcagaaaaatcagatggaccttttcgggattctgataataaattattgcca
gctgccgcccttacatcagaacattcaaagggagcctcttcaattgctattactgctctt
atggaagaaaaggggtaccaggtaccagtccttggaactccgtctttgttgggacagtca
ttattacatggacagttgattcccacaactggcccagtaagaatcaatgctgctcgtcca
ggtggtggccggccaggctgggagcattccaacaagcttgggtacctagtttctccacca
cagcaaattagaagaggagaaagaagctgttacagaagtataaaccgcgggcgacaccac
agtgaacgatcacagaggactcaaggcccatcacttccagcaactccagtctttgtgcct
gttccaccacctcctttgtatccgcctcctccccatacacttcctcttcctccaggtgta
cctgccccacggtttcctcctcggtttcctcctggccagcctccaccagcaggatatagt
gtccctcctccagggtttccaccagctcctgccaatatatcaacaccttgggtatcgtca
ggagtgcagactgcccattcaaataccatccctacaacacaagcacctcctttgtccagg
gaagaattctatagagagcaacgacgactaaaggaagaggaaaagaaaaagtccaagcta
gatgagtttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggag
cgtaggcgctcattttccaggtctaaatctccctatagtgggtcatcgtattccagaagt
tcatacacttactccaagtcaaggtctggctcaacacgctcacgctcttactctcgctcc
ttcagccgctcacactctcgctcctattcacgatcacccccataccccaggagaggcaga
ggcaagagccgcaattaccgttcacggtccagatctcatggataccaccgatctaggtca
aggtcacctccctatagacgataccactcacggtccagatctcctcaagcatttagggga
cagtctcccactaaacgcaatgtacctcaaggagaaacagagcgtgagtattttaataga
tacagagaagttccacccccttatgacatcaaagcctattatgggcggagtgtcgacttt
agagacccatttgagaaagaacgctaccgggaatgggaaaggaaataccgagagtggtat
gagaagtactacaaagggtacgcagtgggagctcaacctagaccctcggccaatagagag
gacttttctnntcagagactcttacctcctaatatcagtaattcacccttcacaggaggg
cacagagactatgctgctggacaaagtcatagaaatagaaatctaggtggcaactatcca
gtaaagctttcaacaagagacagtcacattccaaaagataatccaaaatcgaaggagaag
gagagtgagaatgttccaggagacggcaaaggaaacaagcataagaaacacaggaaacga
agaaaaggggaagagagtgagagcttcctgaacccagagctactggagacttctaggaaa
tccagggaatcctcagggattgatgaaactaagacagatacactgtttgttctcccaagc
agagacgatgctacacctgttagggatgaaccaatggatgcagaatcgatcactttcaag
tcagtatctgacaaagacaagagagaaaaggataagccaaaagtaaaaagtgacaagacc
aaacggaaaagtgatgggtctgctacagccaagaaagacaatgttttaaaaccttctaaa
ggacctcaagaaaaggtagatggagaccgtgaaaagtctcctcgatctgagccgccactc
aaaaaagccaaagaggaggctacaaagattgactctgtaaaaccttcctcgtcttctcag
aaggatgagaaggtcactggaacccctagaaaagcccattctaaatctgcaaaagaacac
caggaggcaaaaccagccaaggacgagaaggtcaaaaaggactgttccaaagacatcaag
tcagaaaagccagccagtaaggacgagaaggccaagaagcctgagaaaaataaactactt
gatagcaagggagaaaaacgaaagagaaaaacagaagaaaagagtgtagataaagatttt
gagtcgtcttcaatgaaaatctctaaagtagaaggaacagaaatagtgaaaccatcacca
aagcggaaaatggaaggtgatgttgaaaagctggaaaggaccccagaaaaggacaagatt
gcatcatcaactactccagccaaaaaaatcaaactcaacagagaaactggaaaaaaaatt
ggaaatgcagaaaatgcatctactacaaaagaaccctctgaaaaattggagtcaacatct
agcaaaatcaaacaggaaaaagtcaagggaaaggccaaacggaaagtagctgggaccgaa
ggctccagctccacgcttgtggattacaccagtacaagttcaactggaggcagtcctgtg
aggaaatctgaagaaaagacagatacaaagcgaacagtcattaaaactatggaggaatat
aataatgataacacagcgcctgctgaagatgttataattatgattcaggttcctcagtcc
aagtgggataaagatgactttgagtctgaagaagaagatgttaaaaccacacaacctatc
cagagtgtagggaaaccatcgagtattataaaaaatgttactactaagccatcagctgca
gttaagtacactgagaaagaaagcgagcagcccgagaaaatgcagaagcttcccaaggag
gcgagccacgagctgatgcagcaggagctcaggagctcaaagggcattgcgtccagtgag
aagggcagagccaaggaccgggagcactcagggtcagagaaggacaaccctgacaagagg
aagagcggtgcccagccagacaaggagagcactgtggaccgcctgagtgaacagggacat
tttaagaatctctctcagtcttccaaagagaccaggacttcagaaaagcacgagtctgtt
cgtggttcctcaaataaagacttcactcctggtagagacaagaaagtggactacgacagc
agagattattccagttccaaacgaagagacgagagaagtgaactagcaagaagaaaagag
tctcctcctcggagtaaagagtctttatctggacagaaaagtaagctgagggaggagaga
gatttacctaaaaaggggactgagtcaaaaaaaagtaattctagtcccccaagagacaaa
aagcctcatgatcataaagccccctacgaaactaaacgcccatgtgaagagacaaagcct
gtagataaaaactctgggaaggagcgggagaagcatgctgctgaagctcgcaatgggaaa
gagtccagtggtggcaaactgccatatatacctaacccgccagaccctcccatggagaag
gagctggctgctgggcaggtggagaagagcaccgtcaagccaaaaccccagctgagtcat
tcctctaggctttcctctgacctgaccagggagacggatgaggctgcctttgaaccagat
tataatgagagcgacagtgagagtaatgtgtctgtgaaggaagaagaagctgttgccagt
atctccaaggacttgaaagagaaaacaacagagaaagcaaaagagagcttgactgtagta
acagccagccagccaggtgcagacaggagccagagccaaagtagccccagtgttagtcca
agtagaagtcatagcccttctggtagccagacccgaagccacagcagcagtgccagctca
gccggaagccaagacagcaaaaagaagaaaaagaagaaagacaagaaaaagcacaagaag
cataaaaagcacaagaagcataagaagcacgcaggcacggatggcgatgtggagaagagc
cagaaacataaacacaagaagaagaaggcgaagaagaacaaagacaaggagaaggagaaa
gatgaccaaaaagtgaaatctgtcgctgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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