KEGG   Mus caroli (Ryukyu mouse): 110304706
Entry
110304706         CDS       T05910                                 
Symbol
Becn1
Name
(RefSeq) beclin-1 isoform X1
  KO
K08334  beclin
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04136  Autophagy - other
mcal04137  Mitophagy - animal
mcal04140  Autophagy - animal
mcal04215  Apoptosis - multiple species
mcal04371  Apelin signaling pathway
mcal05010  Alzheimer disease
mcal05014  Amyotrophic lateral sclerosis
mcal05016  Huntington disease
mcal05017  Spinocerebellar ataxia
mcal05022  Pathways of neurodegeneration - multiple diseases
mcal05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    110304706 (Becn1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110304706 (Becn1)
   04136 Autophagy - other
    110304706 (Becn1)
   04137 Mitophagy - animal
    110304706 (Becn1)
  09143 Cell growth and death
   04215 Apoptosis - multiple species
    110304706 (Becn1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    110304706 (Becn1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110304706 (Becn1)
   05014 Amyotrophic lateral sclerosis
    110304706 (Becn1)
   05016 Huntington disease
    110304706 (Becn1)
   05017 Spinocerebellar ataxia
    110304706 (Becn1)
   05022 Pathways of neurodegeneration - multiple diseases
    110304706 (Becn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110304706 (Becn1)
   03029 Mitochondrial biogenesis [BR:mcal03029]
    110304706 (Becn1)
Membrane trafficking [BR:mcal04131]
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    110304706 (Becn1)
Mitochondrial biogenesis [BR:mcal03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    110304706 (Becn1)
SSDB
Motif
Pfam: APG6 APG6_N BH3 DUF3450 MT HAUS-augmin3 LMBR1 V_ATPase_I FPP Exonuc_VII_L DUF4200 Suppressor_APC
Other DBs
NCBI-GeneID: 110304706
NCBI-ProteinID: XP_021031901
Ensembl: MGP_CAROLIEiJ_G0017210
UniProt: A0A6P5QM44
Position
11:complement(97168495..97182832)
AA seq 448 aa
MEGSKASSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEEE
ANPGEEPFIETRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDL
FDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQLQR
ELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLE
LDDELKSVENQVRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNE
INAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWD
NKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSE
EQWTKALKFMLTNLKWGLAWVSSQFYNK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggggtctaaggcgtccagcagcaccatgcaggtgagcttcgtgtgccagcgctgt
agccagcctctgaaactggacacgagcttcaagatcctggaccgggtcaccatccaggaa
ctcacagctccattacttaccacagcccaggcgaaaccaggagagacccaggaggaagag
gctaacccaggagaggagccatttattgaaactcgccaggatggtgtctctcgaagattc
atccccccagccaggatgatgtctacagaaagtgctaatagcttcactctgatcggggag
gcatctgatggcggcaccatggagaacctcagccggagactcaaggtcactggagacctg
tttgacatcatgtcgggccagaccgatgtggatcacccgctgtgtgaggaatgcacagac
actcttttagaccagctggacactcagcttaatgtcactgagaatgaatgtcagaactac
aaacgctgtttggagatcctggagcagatgaatgaggatgacagtgagcagctgcagagg
gagctgaaggagctggccttagaggaggagaggctgatccaggagctggaagatgtggaa
aagaaccgcaaggtggtggcagagaacctggagaaggtccaggctgaggcggagagattg
gaccaggaggaagctcagtaccagcgggagtatagtgagtttaaaaggcagcagctggag
ttggatgacgaactcaagagtgtggagaaccaggtgcgctacgcccagatccagctggac
aagctcaagaagaccaatgtcttcaatgccaccttccacatctggcacagcggacagttt
ggtacaatcaataatttcagactgggtcgcttgcccagcgttcctgtggagtggaatgaa
atcaacgctgcctggggccagacagtgctgctgctccatgctttggccaataagatgggt
ctgaagtttcagaggtaccgacttgttccctatggaaatcattcctatctggagtctctg
acggacaaatctaaggagttgccgttatactgttctgggggtttgcggtttttctgggac
aacaagtttgaccacgcaatggtagcttttctggactgtgtgcagcagttcaaagaagag
gtagaaaaaggagagactcgattttgtcttccgtacaggatggacgtggagaaaggcaag
attgaagacactggaggcagtggcggctcctattccatcaaaacccagtttaactcggag
gagcagtggacaaaagcgctcaagttcatgctgaccaatctcaagtggggtcttgcctgg
gtgtcctcacagttctataacaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (36)   

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