KEGG   Mus caroli (Ryukyu mouse): 110305155
Entry
110305155         CDS       T05910                                 
Name
(RefSeq) histone H2A.V isoform X1
  KO
K11251  histone H2A
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03082  ATP-dependent chromatin remodeling
mcal04217  Necroptosis
mcal04613  Neutrophil extracellular trap formation
mcal05034  Alcoholism
mcal05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110305155
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110305155
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    110305155
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    110305155
  09165 Substance dependence
   05034 Alcoholism
    110305155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcal03036]
    110305155
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110305155
Chromosome and associated proteins [BR:mcal03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    110305155
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110305155
SSDB
Motif
Pfam: Histone Histone_H2A_C CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 110305155
NCBI-ProteinID: XP_021032618
Ensembl: MGP_CAROLIEiJ_G0016074
UniProt: A0A6P5QNL0
Position
11:complement(3283775..3301210)
AA seq 128 aa
MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILE
YLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIG
KKGQQKTA
NT seq 387 nt   +upstreamnt  +downstreamnt
atggctggaggcaaagctggaaaagacagtggtaaggccaaggctaaggcggtgtctcgt
tcccagcgagctgggctccagtttcctgtgggccgaatccacagacacttgaagactcgc
accacaagccatggacgggtgggcgccactgctgctgtgtacagtgccgcaattctggag
tacctcacagctgaggtgttggagttagcagggaatgcttccaaagatctcaaagtgaag
cgcatcaccccacgtcacttacagcttgcaatccgaggtgatgaagagttggattcactt
atcaaagccaccatagccgggggcggcgtgatcccgcacatccacaagtctctgattggc
aagaaggggcagcagaagactgcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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