KEGG   Mus caroli (Ryukyu mouse): 110305224
Entry
110305224         CDS       T05910                                 
Symbol
Shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal00260  Glycine, serine and threonine metabolism
mcal00630  Glyoxylate and dicarboxylate metabolism
mcal00670  One carbon pool by folate
mcal01100  Metabolic pathways
mcal01200  Carbon metabolism
mcal01230  Biosynthesis of amino acids
mcal01240  Biosynthesis of cofactors
mcal01523  Antifolate resistance
Module
mcal_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    110305224 (Shmt1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    110305224 (Shmt1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    110305224 (Shmt1)
 09160 Human Diseases
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    110305224 (Shmt1)
Enzymes [BR:mcal01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     110305224 (Shmt1)
SSDB
Motif
Pfam: SHMT Aminotran_1_2
Other DBs
NCBI-GeneID: 110305224
NCBI-ProteinID: XP_021032731
Ensembl: MGP_CAROLIEiJ_G0016464
UniProt: A0A6P5QHE9
Position
11:complement(55613047..55635191)
AA seq 478 aa
MADRDATLWASHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALG
SCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFA
VYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYINYDQL
EENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFE
HCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETYYELESLINSAVFPGLQGGPHN
HAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDALTELGYKIVTGGSDNHLILMDLRSK
GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIH
RGIELTLQIQSHMATKATLKEFKEKLAGDEKIQSAVATLREEVENFASRFSLPGLPDF
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggcagacagggatgctaccctgtgggcttctcatgagaagatgttgtcacagcccctc
aaggacagtgatgccgaggtttacagcatcattaaaaaggagagcaaccggcagagggtc
ggattagagctgattgcctcggagaattttgccagccgagctgtgttggaggccctggga
tcttgcttaaataacaaatactctgagggctatccaggccaaaggtattatggcgggact
gagttcattgatgagctggagacgctgtgtcagaagcgtgcattacaggcctaccatctg
gatcctcagtgctggggtgtcaatgtccagccttattcaggctcccctgcaaactttgct
gtgtatactgccctggtagagccccatgggcgaatcatgggcttggacctgccagacggt
ggccatctgacccatggcttcatgacagacaagaagaaaatctctgccacttctatcttc
tttgaatccatgccttataaggtgtacccagagactgggtacatcaactatgaccagctg
gaggagaatgccagcctcttccacccgaagctgatcatcgcagggaccagctgctactcc
cggaacctggactacgcacggctgcggaagattgcagatgataatggggcgtatctcatg
gcagacatggcacatatcagtgggctcgtggcagctggggtggtgccctccccctttgaa
cactgccatgtagtgaccactacaacccacaagaccctgagaggctgccgtgctggtatg
atattctacagaaagggtgtgcgcagtgtggatcccaagactggcaaagagacttactat
gaactggagtccctcatcaactctgctgtgttcccaggccttcaagggggtcctcacaac
catgccattgctggtgttgctgtggccctgaagcaagccatgactacagaattcaaaatc
taccagctccaggtgttggccaactgcagggctctgtctgatgcactcacagagctaggc
tacaaaatagtcacaggtggctctgataatcacttgatcctaatggacctgcgttctaag
ggtactgatggtggaagggctgagaaggtactagaagcctgttctatcgcctgcaacaag
aacacctgcccaggtgacaagagtgcgttacggcccagtggactgcgactggggactcca
gcattgacatcccgaggacttttggaagaagacttccaaaaagtagcacactttatccac
agggggatagagttgacactgcagattcagagccacatggccacgaaggccacactgaaa
gagttcaaagagaagctggcaggagatgagaagatccagagtgctgtggcaactctccgg
gaagaagtggagaactttgcttccagattctcactacctggccttcctgatttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (8)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system