KEGG   Mus caroli (Ryukyu mouse): 110312340
Entry
110312340         CDS       T05910                                 
Symbol
Vars
Name
(RefSeq) valine--tRNA ligase isoform X1
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    110312340 (Vars)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mcal01007]
    110312340 (Vars)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mcal03016]
    110312340 (Vars)
Enzymes [BR:mcal01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     110312340 (Vars)
Amino acid related enzymes [BR:mcal01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   110312340 (Vars)
Transfer RNA biogenesis [BR:mcal03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    110312340 (Vars)
 Prokaryotic type
    110312340 (Vars)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 GST_C tRNA-synt_1g tRNA-synt_1_2 GST_C_2 Val_tRNA-synt_C Jag_N tRNA-synt_1e
Other DBs
NCBI-GeneID: 110312340
NCBI-ProteinID: XP_021041497
Ensembl: MGP_CAROLIEiJ_G0021491
UniProt: A0A6P5R953
Position
17:31742610..31756897
AA seq 1299 aa
MVLPGACVPCSTCSGPLLNLPGLSSGHCTAFRPCTAMSILYVSPHPDAFPSLRALIAARY
GEAGDGPGWGGPHPRICLQPPPSSRTPFPPPRLPALEQGPGGLWVWGAPAVAQLLWPAGL
GGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRGPGQDPQAALGALGKALNPLED
WLRLHTYLAGDTPTLADLAAVTALLLPFRYVLDPSARRIWGNVTRWFNTCVRQPEFRAVL
GEVALYSGARSVTQQPGSEVTAPQKTPAQLKKEAKKREKLEKFQQKQKTQQQPPHGEKKP
KPEKKEKRDPGVITYDLPTPPGEKKDVSGAMPDSYSPQYVEAAWYPWWERQGFFKPEYGR
PSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAG
IATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACF
TMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPG
YKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKYVV
HPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRLEAISIMDSKGALINVP
PPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEM
AQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVPP
GEDPDGRYWVSGRTEAEAREKAAQEFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPN
QSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSK
SLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFG
LCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSATSKPGGHESLVDR
WIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDVYLECLKPVLNGVDQVAAECA
RQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPKAPASLCVTPYPEPSECSWKDPEAE
AALELALSITRAVRSLRADYNLTRTRPDCFLEVADEATGALASAVSGYVQALASAGVVAV
LALGAPAPQGCAVAVASDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAAS
SYSAKVPLEVQEADEAKLQQTEAELRKVDEAIALFQKML
NT seq 3900 nt   +upstreamnt  +downstreamnt
atggtcctgccgggcgcctgcgtaccttgcagcacgtgctcaggtcccctcctcaatctg
cctggtctctcctcaggtcactgcactgctttccgaccctgcacagccatgtccatcctc
tacgtctctcctcaccccgacgccttccccagcctccgagccctcatcgctgcccgatac
ggggaagctggtgacggtcccgggtggggaggccctcacccccgcatctgcttgcagcct
cccccgagcagccggactccattccctccgcctcgcctgcccgccctggagcaggggcct
ggcggcctgtgggtgtggggggccccggctgtagctcagctgttgtggccagcaggcctg
gggggacccgggggcagccgggcagctgtcctggtccagcagtgggtcagttatgctgac
acggagctcatacccgctgcctgcggggcgaccctgcctgccctgggacttcgaggtcct
ggtcaggatccccaggctgcccttggggccctgggcaaggccttgaaccccttggaggac
tggctgcggctgcacacctacctggctggagatacccccactctggctgacttagctgct
gtgacagccttactgctgcccttccgatacgttctggacccttctgcccgccggatctgg
ggcaatgtgactcgctggtttaacacttgtgtccggcaaccggaattccgggctgtgctg
ggagaagtggccctgtactcgggggccaggtctgtcactcaacagccaggctccgaggtc
acggcaccccaaaaaacaccggcgcaactcaaaaaagaggcaaagaaacgggagaaacta
gagaaattccagcagaagcagaagacccagcagcagcccccgcacggagagaagaaacca
aaaccagagaagaaggagaaacgggaccctggggtcattacctatgacctccctacccca
ccgggggagaagaaagatgtaagtggcgccatgcccgactcctacagccctcagtatgtg
gaggctgcctggtatccttggtgggagcggcagggcttcttcaagccagagtacgggcgt
cctagtgtgtcagcacccaatccccgaggcatcttcatgatgtgcatcccgccccccaac
gtgacgggctccctgcacctgggccacgcgctcaccaacgccatccaggactccctgact
cgatggcaccgcatgcgtggggagaccaccctatggaacccaggctgtgaccatgcaggc
attgccacccaggtggtggtggaaaagaagctctggaaagagcggggtctgaaccgacac
cagctgggccgtgaggcctttcttgaggaggtctggaagtggaaagccgagaagggtgac
aggatttaccaccaattaaagaaacttggcagctccttggactgggatcgagcctgcttc
accatggatcctaaattgtcagcaactgtgacagaggcttttgttaggctccacgaagaa
ggggtcatctaccgtagcacccgcctggtcaactggtcctgcaccctcaactcagccatt
tctgacattgaggtggataagaaggagctgacaggccgcaccctgcttcctgtgcctggc
tacaaggagaaggtggagtttggggtcctcgtgtcttttgcctacaaggttcaaggctca
gacagtgacgaggaggtggtggtggcaacaacccggattgagaccatgctgggagacgtg
gctgtagctgtgcaccccaaggatcccagataccagcacttaaagggaaagtatgtcgtc
cacccattcttgtcccggagccttcccatcgtcttcgatgactttgtggacatggagttt
ggcacaggtgccgtgaagatcaccccggcacatgaccagaatgactatgaggttgggcag
cgacacaggctcgaggccattagcatcatggactcgaaaggggccctcatcaatgtgcct
ccacctttcctgggcctgcccaggtttgaggccaggaaggctgtgctggcggcactgaag
gagcggggcctgttccgtggcgtcaaggacaaccccatggtggtgccactttgcaaccgc
tccaaggatgtggtggagcctctattaaggccacagtggtacgtgcgctgtggggagatg
gctcaggctgccagtgctgctgtgacccggggtgacctccgtatactgcctgaggcccat
caacggacgtggcattcttggatggacaacatcagagactggtgcatctctcggcagctg
tggtggggccaccgaatccctgcctactttatcaccgtccatgacccggcagtaccccct
ggggaggaccctgatgggcggtactgggtaagcggacgcactgaagcagaggcccgagag
aaggcagcacaggagtttggagtgtcccctgacaagatcagccttcagcaagatgaggat
gtgttggatacctggttctcctccggtctcttccccttctccatctttggctggcccaat
cagtcagaagacctcagtgtgttctaccctgggaccctgttggagacaggccatgatatc
ctcttcttctgggtggcccggatggtcatgctcggcctgaagctcactgggaagctaccc
ttcagagaggtctatctccatgcaatcgtgcgtgatgctcatggcaggaagatgagcaag
tctcttggcaatgtcatcgatcccctggatgtcatccatggagtttccttgcagggcctc
catgaccaactactgaacagcaacctagatcccagtgaggtggagaaagccaaagaagga
cagaaggccgactttcctgcagggattcccgagtgtggcactgatgccctacgctttgga
ctctgtgcctacacatcccaaggtcgagacatcaacctggatgtgaacaggatcctgggg
taccgtcacttctgcaacaaactctggaatgccaccaagtttgccctgcgcggccttggg
aagggctttgtgccctcagcaacctccaagcctggagggcacgagagcctggtggaccgc
tggatccgcagccgcctgactgaggccgtgaggctcagcaatgaaggcttccaggcttac
gatttcccggccatcaccaccgcccagtacagcttttggctctatgagctctgtgatgtc
tacttggagtgtctaaaacctgtgctgaatggagtggaccaggtggcggcagagtgtgct
cggcagaccctctacacctgcctggatgttggcctgcgactgctctcgcccttcatgccc
tttgtcacagaggagctatttcagagactgccccggcggacaccaaaagcgcctgctagc
ctctgtgtcaccccgtacccagagccctcagagtgctcctggaaggaccctgaagccgaa
gctgctcttgaactagctctgagcatcactcgagctgtgcgctccctgcgtgctgactac
aacctgacccgcaccaggcccgactgtttcttggaagtagccgatgaggccacaggtgcc
ttggcctcggcagtgtcgggctacgtgcaggctctggccagtgcgggcgtggtggctgtc
ctcgccctgggtgcccctgcaccgcagggctgcgctgtagctgtggcctctgaccgctgc
tccatccacctgcagctgcaggggctagtggacccagcccgggagttgggcaagctgcag
gccaagcgaagtgaggcacagcggcaggctcaacgtctgcaggagcgccgtgctgcctcc
agctactcagcaaaggtgccccttgaggtccaggaggcagatgaagcgaagttgcaacag
acagaggcggagctcaggaaggtggatgaggccatcgccctgttccagaagatgctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (32)   

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