KEGG T02150: Mycch

Mycolicibacterium chubuense: Mycch_4153

Entry

Mycch_4153        CDS       T02150

Name

(GenBank) topoisomerase IB

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mcb Mycolicibacterium chubuense

Brite

KEGG Orthology (KO) [BR:mcb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcb03032]
    Mycch_4153
   03400 DNA repair and recombination proteins [BR:mcb03400]
    Mycch_4153
Enzymes [BR:mcb01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Mycch_4153
DNA replication proteins [BR:mcb03032]
Prokaryotic type
  DNA Topoisomerases
   Mycch_4153
DNA repair and recombination proteins [BR:mcb03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Mycch_4153

SSDB

Motif

Pfam:

Topoisom_I Top1B_N_bact Glyphos_transf

Other DBs

NCBI-ProteinID:

AFM18871

UniProt:

I4BNL4

Position

complement(4358531..4359550)

AA seq 339 aa
MRLTRSKLDTPGIVRKRRGKGFAFYGPDGELLSDPDTAQRIKDLVIPPAWKNVWISPRPN
GHIQAVGTDAAGRRQYLYHERWQQERAEEKFDRVLELSARLPEWRTQIAADLAGRGLTRD
RVLALALQLLDRGYFRAGGEQSAEEHEHYGLATLLCEHVTLKKNAVEFDYPAKSGVQRTV
EVDDPEVVRAVRSLMRRNERTERLLVCRSNSGSWVDVRADDLNTRFKELVGDEFSVKDLR
TWHGTVLAAAAFADAKEPTSKTAVKRAASAVMKEVSQELGNTPAVARASYVDPRVVVGYE
RGVTIAAATRRAAKMKNPDDAQAIVEKATRNLIRRIASK

NT seq 1020 nt +upstreamnt +downstreamnt
gtgcggctcactcgtagcaagctcgacacccccggcatcgtcaggaaacgtcgcggtaaa
gggtttgccttctacggtcccgacggtgaactgctgtccgatccggacaccgctcagcgg
atcaaggacctggtcatccccccggcgtggaagaacgtgtggatcagccccaggccgaac
gggcacatccaggccgtcggcaccgacgccgccggacgacggcagtacctctaccacgag
cggtggcagcaggagcgcgccgaggagaaattcgaccgcgtgctcgaactctcggcacgg
ctgcccgaatggcgcacgcagatcgcggcggatctggcggggcgcggcctgacccgggac
cgggtgctggcgctggccctgcagttgctcgaccgcgggtacttccgcgcagggggtgag
cagtccgccgaggagcacgagcactacgggctggcgacactgctgtgcgagcacgtgacg
ctgaagaagaatgccgtcgagttcgactatcccgccaagagcggggtgcagcgcaccgtc
gaggtggacgaccccgaggtcgtgcgggccgtgcgctcgttgatgcggcgcaacgagcgc
acggaacgacttctggtgtgtcgcagcaactccggtagctgggtcgatgtccgcgccgat
gatctcaacactcggttcaaggaactggtcggcgacgagttcagcgtgaaggatctgcgc
acctggcacggcacggtgctggccgccgccgctttcgccgatgccaaggagccgacgtcg
aagacggcggtcaagcgggccgcctcggcggtgatgaaggaggtctcccaggaactcggc
aacactccggcggtggcgcgggcgtcctacgtcgacccgcgggtcgtcgtgggctacgaa
cgcggcgtcaccatagcggccgccacccggcgggcggccaagatgaaaaaccccgacgac
gcgcaggcgatcgtcgagaaggccacccgaaacctcatccgccggatcgcgagcaagtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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