KEGG   Methylorubrum extorquens CM4: Mchl_3139
Entry
Mchl_3139         CDS       T00809                                 
Name
(GenBank) AlkA domain protein
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
mch  Methylorubrum extorquens CM4
Pathway
mch03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mchl_3139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mch03400]
    Mchl_3139
Enzymes [BR:mch01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     Mchl_3139
DNA repair and recombination proteins [BR:mch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Mchl_3139
SSDB
Motif
Pfam: AlkA_N HhH-GPD HHH
Other DBs
NCBI-ProteinID: ACK83977
UniProt: B7KS92
Position
complement(3315452..3316378)
AA seq 308 aa
MTRTPSPATREDGACFTLACRQPYDWAHLERFFADHASPGVETVTPGRYARTFALDGHRG
SVSVAAEANVLSVRIRGLGSDDDHENILARVRAMFDLDADPRAIAAGLGRDPFTAGLVGR
RPGLRMPGAFDGFELAVRAILGQQVSVAAATRLAGRLVAGFGTPLDGETCGNEPGLTHLF
PTPKQLVDAEISLVLNMPRARGRAIQGLAAAMLAMPDLFAPGGELDATVARLKALPGIGD
WTAHYVAMRALAQADAFPAGDVGLMRALDAGDGRPSRLALLDRAAAWRPWRAYAAIHLWA
EDAARRMP
NT seq 927 nt   +upstreamnt  +downstreamnt
atgacgcgcaccccttcgcctgcgacccgagaggacggggcctgttttacgctggcctgc
cgccagccctacgattgggcgcacctcgaacgcttcttcgccgatcatgcgagccccggc
gtcgaaaccgtgacgcccggccgctatgcccgcaccttcgccctcgacgggcatcgcggc
tccgtctccgtggcggctgaggcgaatgttctgtcggtccgtatccgcggcctcggctcg
gatgacgaccacgaaaacatccttgcgcgggtgcgggcgatgttcgatctcgacgccgac
ccgcgggcgatcgctgccggactcggccgcgatccgttcaccgctggcctcgtggggcgc
cggccgggtttgcggatgccgggcgccttcgacgggttcgaactggcggtccgggcgatc
ctcggccagcaggtctcggtcgcggccgccacgcgtctcgccggccgactcgtcgcgggt
ttcggtacgcccctcgacggggagacgtgcgggaacgagccgggtctcacgcacctgttt
ccgacgccgaagcagttggtggacgccgaaatctcgctcgtgctcaacatgccccgcgcc
cgcggccgggcgatccaggggcttgccgcggcaatgctcgccatgccggatctgttcgcg
cccggcggcgaactcgacgcgacggttgcccggctgaaggccctgcccggcatcggggac
tggaccgcgcattacgtcgccatgcgcgcactggcgcaagccgacgcctttccggcgggg
gatgtcgggctgatgcgtgccctcgatgccggcgacgggcggccgagccggctggcactt
ctcgaccgtgcggcggcttggcggccctggcgagcctatgccgcgatccatctctgggcc
gaggatgccgcgcggaggatgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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