KEGG   Momordica charantia (bitter melon): 111007023
Entry
111007023         CDS       T05045                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03022  Basal transcription factors
mcha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111007023
  09124 Replication and repair
   03420 Nucleotide excision repair
    111007023
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:mcha01001]
    111007023
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcha03021]
    111007023
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111007023
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111007023
Enzymes [BR:mcha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     111007023
    2.7.11.23  [RNA-polymerase]-subunit kinase
     111007023
Protein kinases [BR:mcha01001]
 Serine/threonine kinases: CMGC group
  CDK family
   111007023
Transcription machinery [BR:mcha03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     111007023
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     111007023
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     111007023
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase DUF6193 Seadorna_VP7
Other DBs
NCBI-GeneID: 111007023
NCBI-ProteinID: XP_022134854
UniProt: A0A6J1BZY1
Position
Unknown
AA seq 416 aa
MSELDPSKKVADRYLKREVLGEGTYGVVFKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDML
YLPDYVEFQYVPAPPLRSLFPIASDDTLDLLSKMFAYDPKSRISIQQALEHRYFTSAPLP
TDPSKLPRPTSKREPVNSRVSDLNSNEGPIVLSPPRKSRRVMPEREGFEGNAHRIDKHDD
HVNELREVAAENTSKNEPVPMSLDFSIFGGKPPNRPTINSADRSHLKRKLDLEFQQ
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgtctgagctcgatccatcaaagaaagtagccgatagatatctaaagcgcgaggttctc
ggggagggtacctatggtgttgtatttaaagccattgatactcagactggtcagacggtt
gcaatcaagaaaattcggcttgggaaacaaaaagagggagtaaattttacagctcttcga
gaaatcaagctgctaaaagagctcaaggatccaaatataattgagttaattgatgcattt
cctcacaaaggaaatttgcatcttgtatttgaatttatggagacggacctcgaagctgtg
atacgtgatcggaacatatttctttccccagctgacataaaatcataccttcagatgacg
ctgaaaggccttgctttttgccacaaaaaatgggttttacatagggatatgaagccaaat
aatttgttgataggatcaaatggtcaactgaaacttgcagattttggtttggctcggata
tttgggagcccagatcgcagatttactcaccaggtttttgctcgatggtacagagcacct
gagctattgtttggcactaagcaatatggttctgcagtggatgtatgggctgcagcttgt
atttttgctgaactactcctccgtcggccttttcttcagggttcgagcgacattgatcaa
ttagggaagatctttgcagcttttggaactcctaccccttctcagtggcctgatatgctg
tatctgcctgattatgtggagttccaatatgttcctgcacctcctcttcgatcattgttc
cctatagctagtgatgacacactggatctcctatcgaagatgtttgcttatgatccgaaa
tctaggatttccattcagcaagcattggagcacaggtacttcacatctgcaccgctcccc
acagatcctagtaagcttccaaggcctacttcgaagcgtgaacctgtgaactctagagtc
tcggacttaaattcaaatgagggtcccattgtcctctcacccccaaggaagtcaagaaga
gtaatgccagagcgtgagggttttgaaggaaatgcacatagaattgataagcatgatgac
catgttaatgagttgcgagaggtagctgctgaaaacacaagcaagaatgaaccagtgcca
atgtcattagatttttctatttttggtggaaaacctccaaatagaccaacaatcaacagt
gctgatagatcacatctgaaaaggaaattagatcttgaattccagcaataa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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