KEGG   Momordica charantia (bitter melon): 111008217
Entry
111008217         CDS       T05045                                 
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03013  Nucleocytoplasmic transport
mcha03015  mRNA surveillance pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111008217
  09122 Translation
   03013 Nucleocytoplasmic transport
    111008217
   03015 mRNA surveillance pathway
    111008217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111008217
   03041 Spliceosome [BR:mcha03041]
    111008217
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111008217
Spliceosome [BR:mcha03041]
 Complex C
  Other components
   EJC/TREX
    111008217
SSDB
Motif
Pfam: RSB_motif SAP DUF6470
Other DBs
NCBI-GeneID: 111008217
NCBI-ProteinID: XP_022136541
UniProt: A0A6J1C3S7
Position
Unknown
AA seq 772 aa
MSSKSKYPILDNRPIDQWKVTELKEELKRRKLTIKGLKEDLIKRLDEALRIERENAEETN
GVEGGDPPLTDTANDQEHVSIVSQTTQETNEDANKVEKKVDDVEVQVDKNDGTAAVGKGK
LQDGVSLNGSPRVEEGSAIHVTTLETKVTVTETVVSEVALSEEALPNIESKDNEDSKLQS
EIGDSKFQLEIEDSKPQLETEDTKPQLETEDTRPQLESEDSKPQLESEDTKPQLDDVNCE
PQVENENLKSQHADPMHYSSAPDDQVSEVSPVLGSQVRTDSISTDSVTINEMIELKENIS
ADHVKLELDVKQEMVEPSSSIIVPDSGESHPMDVEEPPVNKNVEESPANRDVVESPMNKD
VVEPLVNKDVDSPVNKDVEEKHDVKGMISELHKKHDGVDAGFSEKLNLDRSSGDDSMEDA
IENKTDSGNNPEEMGEKNIKSEEPISKEEKFADIAVRGSTADKKNLDIENDVSSSPAEKR
KLHACKLDSRETTQTEGTFMDPAVVGNNESVKRQRRWNAENLKIPEPQNASHTSTSNSKD
PHQSTALKRNFSRSDSTVSEDPSKERVVPPSPKPPTNSLRIDRFLRPFTLKAVQELLGKT
GNVTSFWMDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLMAEFVDPQEVKIRVE
APQTPTPAAVAPPVSTVPPPLHPEPSPRQTRQQLAPPPSLPPPPPTNNLAQTREQLPLPP
PPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQVKLSAARGKDHTK
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgtcttccaaatcgaaatatccaattcttgataatcgaccgattgatcagtggaaggtt
acggagttgaaagaagagcttaagagacggaaattaaccatcaagggcctgaaggaagat
ttgataaaacggttggatgaagcacttcgaattgaaagggaaaatgccgaggaaaccaat
ggtgttgagggtggtgaccctccacttacagatactgccaacgaccaagaacatgtatct
attgtttctcaaacaacgcaagaaacaaatgaagatgctaacaaggttgagaagaaggta
gacgatgttgaagttcaggtcgacaagaatgatggtactgcagcggtgggcaaagggaaa
cttcaagatggggttagtctcaatggttctcctagggtggaagaggggtcggctatccat
gtcactactctggaaactaaagttactgtgactgaaactgtggtttccgaagtagcatta
agtgaggaagctttaccgaacattgaaagcaaggataacgaggattcaaagctccagtcg
gagattggggattcaaagttccagttggagattgaggattcgaagccccagctggaaact
gaggatacgaagccccagctggaaactgaggatacaaggcctcagctggaaagtgaggat
tcaaagccccagctggaaagtgaggatacaaagccccagctggatgatgtgaattgtgag
ccccaggtggagaatgagaatttgaagtctcaacatgcagatcccatgcactactcttct
gctccagacgaccaggtatctgaggtcagccctgttttagggtctcaagtaagaactgat
tctatttctactgattctgtgacaattaatgaaatgattgaactaaaggaaaatatatct
gctgaccatgtgaaattagaactagatgttaagcaggagatggtggaaccatcatccagc
attattgtcccagattctggtgaatcacatccaatggatgttgaagagccacctgtgaac
aagaatgttgaagagtcacctgcaaacagagatgttgtggagtcacccatgaacaaagat
gttgtagaaccccttgtgaataaagatgttgattcacctgtgaacaaagatgttgaggag
aaacatgatgttaagggcatgatttctgaacttcacaagaaacacgatggtgtagatgcg
gggttctctgaaaagttaaatttagatagaagttctggggatgattcaatggaagatgct
atagagaataagactgattcggggaataatcctgaagaaatgggagagaagaatataaaa
agtgaggagcctatatccaaagaggaaaagtttgcagacattgcagtgcgtggctcaact
gcagacaaaaagaatcttgatatagagaatgatgtttcatcttcgcctgctgaaaaaaga
aagcttcatgcctgcaaacttgattctcgggagacgacacaaacagaaggaacttttatg
gatccagcagtggttggaaataacgagtccgtaaagagacagcgcaggtggaatgctgaa
aacctaaaaattccagagccacaaaatgcttctcacacatccactagtaactcaaaggac
cctcatcaatccactgctctgaaacgcaacttctccagatctgactccacagttagtgaa
gatccatcgaaggaacgtgttgttccaccatcaccaaaacctcccacaaattcactaaga
attgatcgatttctacgtccatttaccctcaaagctgtgcaagaacttttgggcaagact
ggtaacgtcaccagtttctggatggatcacatcaagacgcattgctatgtaacttactca
tccgttgaagaagcaatgaaaactagagatgctgtttacaacctgcaatggccaccaaat
ggtgggcgccttctcatggctgagtttgttgatcctcaagaagtaaagattcgagtggaa
gctccacagacacctacacctgcagcagttgctccaccggtctctaccgtgcccccaccc
ttgcatcctgagccttcaccccgtcaaacaaggcagcaacttgctccaccaccttctctt
cccccacccccacccacaaacaaccttgctcaaacaagggagcagcttccacttccaccc
ccgcctgcacttcctgataaagtcgatactcccattgtcaccctagacgacctcttcagg
aaaaccaaagcaactcctcgcatctactatttacctttatctgatgaacaggtgcaggta
aaactttcagcagcaaggggaaaagaccacacaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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