KEGG   Momordica charantia (bitter melon): 111022989
Entry
111022989         CDS       T05045                                 
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111022989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcha03009]
    111022989
Ribosome biogenesis [BR:mcha03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    111022989
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 PQQ PQQ_2
Other DBs
NCBI-GeneID: 111022989
NCBI-ProteinID: XP_022156018
UniProt: A0A6J1DPG2
Position
Unknown
AA seq 638 aa
MCLFFYFFIILNFRIMGLSNIRDLLTSYSSDLHFFAISSGDGRIKIWDTLKGQIQAEFAD
FFTSNSTSILTKPEKGHLSIDYKCMKWLSWEKKRKRKRQCSLLLLGTGSGDVLALDVSAG
ELKWKISDCHPGGVTTISFPTHGQCIYTAGANGMLCEIDSLTGNLLRKFKASTKPISCIS
VSPDGKIIATAAAQMKIFNCSDHKKIQKFSGHPGAVRCMVFTEDGKYILSSAVGERYIVI
WSLGGEKKQSASCVLAMEHPAVFVDXRCMKNGAGETTLNILAISEIGVCYYWYGQNLEEL
RNAKPTKVSISDNDISSKSKKWAIPAIYTAKLHGIPKPGSVQVFLAHGLPVKPCFQTVVV
HSGTDIILSSSHDGILLPNQSIGKFKKGLDVQGGVVVLDRANVEDALRPIPKVFNSQEKS
TLYQDLQVGRNEVMTQLVDNRSRSEDDAGEEGSTAVCIEDQLRSLGILNTTDDHTSESIL
KSTIFKGIDLEANMSQKKLREAVLSLAPVDACKLLRNLVNIWQSRLRSGKNVLPWIYSLL
LNHSQHVLSQEQSNQILDSLFKITKSKETAVQPLLQLSGRLQLVLAQIERASANITDPAI
QRGPVIDENESDDDDEEVDDVLYGEEEYESELSSDXEN
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgtgtttatttttttatttttttattattctaaatttcagaatcatgggattgtcaaat
atcagagatctactgacatcttatagctctgatttgcatttctttgctatcagctctgga
gatggtcgaattaagatatgggacacattgaagggccagatacaggctgaatttgcagat
ttctttacatctaattcaacgagcatactcacgaaaccagaaaaagggcatctatcaatt
gattacaaatgcatgaagtggttgtcatgggaaaaaaagagaaaaagaaagcgccaatgt
tcgttgttattgttaggaactggtagtggggatgtgttggctcttgatgtatcagctggt
gaattgaagtggaaaataagtgattgtcatcctgggggtgttactacaatttcatttcct
actcatggtcaatgcatttataccgctggtgccaatggaatgctatgcgaaattgattct
ttgacgggaaacctgctgaggaagtttaaggcttccacaaagccaatatcttgtatttct
gtttcaccagatggcaagataatagcaactgcagctgcacaaatgaagatcttcaattgt
tctgaccacaaaaagatacaaaagttttctggtcatcctggagcagttcgatgtatggtt
tttactgaagatgggaaatacatcctctcgtccgctgttggtgaaaggtatattgtgatt
tggagtttaggtggagagaaaaagcagtcagctagttgtgttcttgcaatggagcaccct
gctgtctttgtggacrgtaggtgcatgaagaacggagccggtgaaactactctaaacatt
ttggctatatcagaaattggtgtttgttattattggtatggacagaatcttgaggagtta
cgaaatgccaagcctactaaagtatcaatatctgataatgatatttcctccaagagtaaa
aaatgggcgatacctgcaatttacacagcaaaattacacggaattcctaaacctggctcg
gtgcaagtgttccttgcacatgggttgccagtgaaaccatgctttcagactgttgtggtg
cattctggaactgacattatcttaagcagctcccatgatggaattcttctaccaaatcaa
tcgattggaaagttcaagaagggcttagatgtacagggtggagtggttgtattagatcga
gctaatgtcgaagatgccttacgtcccattccgaaggttttcaattctcaagagaaaagc
accttatatcaagatttgcaagtcggccgcaatgaagtaatgactcaattagtcgacaac
aggagccgatcagaagacgatgctggagaagagggctctacagcagtttgcattgaggac
caacttcgatcgctaggcatactgaacactacagatgatcatacatctgaatccatcctg
aagtctacaatattcaagggcatcgatctcgaagctaatatgtcgcagaaaaaattaaga
gaggcagtcttatcattggcaccagtcgatgcatgcaagttactcagaaacttggttaac
atctggcaatccaggttgcgtagcggaaagaatgttctaccatggatttatagtttattg
ttgaatcacagccaacatgtcttgtctcaagaacaatcgaatcagatacttgattctcta
tttaagattactaaatccaaagaaactgcggttcagcctctacttcaattatcaggtcgc
ttgcaactggtattggcacaaattgaaagggcatcggccaacataaccgatccagcgata
caacgcggtcccgtaatagatgaaaatgagagtgacgatgatgatgaagaagtcgatgat
gttctttacggggaagaagaatatgaatctgagttgagtagtgatgrtgagaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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