KEGG   Momordica charantia (bitter melon): 111024428
Entry
111024428         CDS       T05045                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111024428
   03009 Ribosome biogenesis [BR:mcha03009]
    111024428
Enzymes [BR:mcha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111024428
Spliceosome [BR:mcha03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    111024428
Ribosome biogenesis [BR:mcha03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    111024428
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22 ARTD15_N
Other DBs
NCBI-GeneID: 111024428
NCBI-ProteinID: XP_022157812
UniProt: A0A6J1DVH7
Position
Unknown
AA seq 739 aa
MGFSFEFDPPSDEELDHSEAEEEDEEQGVEEEEDEPISRRRTESPWDFASYSESVAEEHA
RRSTTSVDYKISKLLEKRSGSFTPAAIADDYESSEAESDRQEDYRPEDDDDGNSHVGDIK
PFFSPSDGASFHANSFMELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAIT
GSGKTAAFSLPTLERLLYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIV
GGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAE
IRELVRLCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRR
MREVNQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLD
ALELFRKQQVEFLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAV
TFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIKKWSETIERMEEQVTTILREEREERALR
KAEMEATKAENMIVHQEEIFSRPKKTWFISDKEKKLVAKAAKASLDKGKTSGNEVLSAQH
AEDLRMKEKRKRECEKNLPRKKRRRLEAAREMLEEEKQNDKTGGGGENKKDKAGLSLVKL
AYRRAKAVKAVKKALDSGKIVKNQNQKTKHSSHKTESRSEEMREMFQNDMSEQKQKRRGG
GGKKKSKHSFKSKSRYKRK
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgggttttagttttgaattcgatccccccagcgacgaagaactggaccattccgaagcc
gaagaagaagatgaagaacaaggtgtggaagaggaggaagatgaacctatttctcgccgc
cgcactgaatctccttgggattttgcttcctactccgagtcagtcgccgaagaacatgct
cgtcgaagcactacctccgttgattacaaaatctccaaacttctagagaagcgctctgga
agcttcactccagccgccattgccgatgattatgaaagttctgaagcagaatctgacaga
caagaagattatagaccggaagatgacgatgatggaaatagtcatgttggtgatattaaa
ccctttttttcaccttccgatggggcgtcctttcatgcaaattcgttcatggagctcaat
ttgtcgcgcccattgattcgggcatgcgaggctttgggatatgcaaagccgacaccaatt
caggcggcttgcataccgttggcattaactggacgtgatatatgtggaagtgcaattaca
ggttctggaaagactgcagccttctcactacctactttggagaggttactgtatcggcca
aaacgagatcgagcaataagagtgctaattctaactccagctagagaattggctattcaa
gttcacagtatgatagagaaacttgctcagtttactgatatcagatgttgcttgatcgtt
ggtgggctttcaagaaaggagcaagaagcagccttaagatcaatgcctgatgtggttgtg
gccactccaggacgtatgattgatcatttacgcaattccatgtcggtagatttggatgat
ttagcagttttaatacttgatgaggcagatcgtctattggagcttggatttagtgctgaa
attcgtgaactggtccgtctttgtccaaaaagaaggcagacaatgctattttctgctacc
atgacagaagaagttgatgagctcatcaagctttccttgaccaaaccattgcgcctctca
gctgacccagctaccaagaggccaaaaacattgacagaggaggtcgttagattacgtaga
atgcgtgaagtgaatcaggaagcggtccttcttgctctgtgctcaaagacatttacttct
aaagttattatatttagtggaaccaaacaggctgctcataggctaaagattttatttgga
ttagctggctttaaagctgctgagcttcatggaaatcttacccaagttcagcgtctcgat
gccttagaactctttaggaaacaacaagttgaatttcttattgctactgatgtggctgct
cggggcctggatattattggtgttcaaactgttataaactttgcatgtcctcgtgatctc
accagctatgttcatcgagttggtcgtactgcaagagctggtcgagaaggatatgctgtt
acgtttgtgacagacaatgacagatctcttttgaaagccatagctaagagagctggttca
aagctgaagagcagaattgttgctgagcaatcaataaaaaagtggtctgaaacaattgag
cgaatggaagagcaagttactacgattctacgggaagagagagaagaaagagctctaagg
aaagctgagatggaagcaacgaaggcagagaacatgattgttcatcaggaagaaattttt
tcacgccctaaaaaaacctggtttatatctgacaaggaaaaaaagcttgtagcgaaagca
gctaaggcatctttggacaaaggaaagacttctgggaatgaggtcttaagtgctcaacat
gctgaagaccttaggatgaaagaaaagaggaagcgcgagtgtgagaaaaatttgcccagg
aagaagcgcaggagattggaagcagctagagaaatgttggaggaggagaagcaaaatgac
aaaacaggaggtggaggagaaaataagaaagataaagctggattgtcacttgtcaaactt
gcctaccgtcgggcaaaagcagtgaaggctgtgaaaaaggcacttgactcgggcaagatt
gtgaagaatcaaaaccaaaaaaccaaacactcttcccataaaactgaatcaagatctgaa
gaaatgcgagagatgttccaaaatgacatgagcgagcagaagcagaaacggcgtggcggt
ggcggaaagaaaaagtctaagcattccttcaaaagcaagtcaaggtacaagcgtaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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