KEGG   Mesoplasma chauliocola: CK556_02990
Entry
CK556_02990       CDS       T05062                                 
Name
(GenBank) hypothetical protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mchc  Mesoplasma chauliocola
Pathway
mchc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mchc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CK556_02990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mchc03019]
    CK556_02990
   03009 Ribosome biogenesis [BR:mchc03009]
    CK556_02990
Enzymes [BR:mchc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CK556_02990
Messenger RNA biogenesis [BR:mchc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CK556_02990
Ribosome biogenesis [BR:mchc03009]
 Prokaryotic type
  rRNA helicases
   CK556_02990
SSDB
Motif
Pfam: DEAD Helicase_C DUF2608 CMS1 AAA_19 HEM4 UvrA_inter
Other DBs
NCBI-ProteinID: ASZ09294
UniProt: A0A249SNP7
Position
complement(662016..663878)
AA seq 620 aa
MTFKELQLNSKILTALEKANFNEATEIQARAIPLFLESKNIFGKSSTGTGKTASFVLPIL
QNIDPNKRKVQAIIMAPTRELAMQIVTQIRLFGSRIENIVIAPLIGGADMRDQIKRLRDS
QIVVGTPGRVNDHLNRKTLKLDEVQTIILDEADEMLKMGFKNEIDALFEKISPNVQVGLF
SATTSPKVMQIANDYMKDYEIIEIQNQVEVNANITNTFIFTKGYSKDELLIKVFEKHKPK
RAIIFSNTKNHTDKIADDLKDAGIKAIVINGDKRQSQRSRAIAKFRNSEIDVLVATDVVA
RGIDINGVDFVINYDVSMEDEHFIHRIGRTGRNNTKGDSITFVQSQNVLRQIKGIEKEFN
LTIDEMLISEYGELEKQAGRANSGRNERARGDRRDSGRQREDKRNAGHNDRRGSNRGERK
RTSERLNTSRNNWSSQSWEERILNLSPEEKEIAKKALSLVDDYPGEFSNSVSARENSGGR
DRKKSGRQRDDRRNSGNNDRRDSNRGVKRDSGPRDRRESNKNLSNKYEGKRHSSWDVKTD
YSKQDSDRWERVTGKEKHPELSDRRTNKSSGRRDDKKNDKRSSGRGEWTHSGPKQNKGSG
TRGRRNSSSNSSGKNSRSKW
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgacatttaaggaattacaattaaacagtaaaattcttacagctcttgaaaaagctaat
tttaatgaagctacagaaattcaagcaagagcaatacctttatttttagaaagtaaaaac
atatttggtaaatcaagcacaggaactggaaaaacagcttcttttgtattaccaatttta
caaaatatcgatccaaacaaaagaaaagttcaagcaattattatggccccaactagagaa
ttagctatgcaaatagttactcaaattagattatttggttcaagaattgaaaacatagtt
attgcacctttaattggtggagcagatatgagagaccaaattaaaagattaagggactca
caaatagttgttggaactccaggaagagttaatgaccacttaaatagaaaaactttaaaa
ttagatgaagttcaaactattattttagatgaagctgacgaaatgctgaaaatgggattt
aaaaatgaaattgatgcgttatttgaaaaaatatcacctaatgttcaagttggattattt
tcagctacaacttcaccaaaagttatgcaaatagctaatgattatatgaaagactatgaa
attattgaaattcaaaatcaggtagaagtaaatgctaatattacaaacacttttattttt
acaaaaggatatagcaaagacgaattgcttattaaagtttttgaaaagcataagccaaaa
agagcgataattttttcaaatacaaaaaatcacacagataaaattgcagatgatttaaaa
gatgcaggaattaaagctattgttattaatggagataaaagacaatctcaaagatcgcgt
gctattgcaaaatttagaaatagtgagattgatgttctggttgcaactgatgttgttgcc
cgtggaattgatataaatggtgtagattttgttattaattatgatgtttcaatggaagat
gagcattttatccatagaattggaagaacaggtagaaacaatacaaaaggtgattcaata
acttttgttcaaagtcagaatgttttaagacaaatcaagggaattgaaaaagaatttaat
ttaacaattgatgaaatgctaatttcagaatatggagaattagaaaaacaagcaggaaga
gcaaactcaggcagaaatgagcgtgcacgtggagatagaagagattcaggtcgtcaaaga
gaagacaaaagaaatgcaggtcacaatgatagaagaggttcaaatcgtggtgaaagaaaa
agaacaagcgagagattaaatacttcaagaaacaattgatcttcacaatcatgagaagaa
agaattttaaatttatcgcctgaagaaaaagaaattgctaaaaaggctttatctttggtt
gatgactatccaggagaattttcaaattcagtaagtgctagagaaaattcaggtggtaga
gatagaaaaaaatcaggtcgtcaaagagatgacagaagaaattcaggtaataatgataga
agagattcaaatcgtggtgtaaaaagagattcaggtcctagagatagaagagaatcaaac
aaaaatttatctaataaatatgaaggtaaaagacattcttcatgagatgtaaaaacagat
tattctaaacaagactcagatcgttgagaaagagtaacaggaaaagaaaaacatccagag
ttgtctgatagaagaacaaataaatcttcaggtcgtagagatgataaaaaaaatgataag
agaagttcaggtcgtggtgaatgaactcattcaggaccaaaacaaaacaaaggttctggt
acacgtggaagaagaaattcttcaagtaattcatcaggaaaaaacagtagaagtaaatga
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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